Back to search

Peptide record

TPDB92409

PTD Antibacterial Antiviral Blood-Brain Barrier Cell-penetrating Peptides standard
6 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB92409
PTD
Antibacterial Antiviral Blood-Brain Barrier Cell-penetrating Peptides
Anti-infective peptides Delivery and barrier-penetrating peptides
Peptipedia dbAMP 3.0 DRAVP 2.0 B3Pred BBPpredict CellPPD CellPPD-MOD CPPsite3.0 MLCPP 2.0 PerseuCPP
standard
No
A 6-aa standard natural multi-activity (Antibacterial, Antiviral, Blood-Brain Barrier, and other sources) peptide sequence curated from Peptipedia, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.
Chemical: Puromycin
Sequence
PFVYLI
Physicochemical Analysis
C40H58N6O8
ARNDCEQGHKMSTW
ILFPYV
750.94
5.94
0
0
5
-0
-2.42
2.067
178.33
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
1490
198.42
1
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
1
L
0
K
0
M
1
F
1
P
0
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 1 K: 0 M: 0 F: 1 P: 1 S: 0 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
6
C40H58N6O8
750.94
5.94
-0
-2.42
2.067
Free
Puromycin
L
Linear
Free
N[C@@H](Cc1ccccc1)C(=O)/N=C/C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCN=C)C(=O)O
Evidence Records 1 records
Evidence 1 Activity

Activity

Cell-penetrating Peptides

Target

K562 Pro-Erythroid Cells, Nk-92 Cells , Hsc-3 Cell Line,MCF-7

Source & Reference

CPPsite3.0
CPPsite3
(Greek patent, No.: 1010063),Patent Office (EP20823912.9),WO2021/094792A1

Other

Source Activity Label Source Definition
Cell-penetrating Peptides
CPPsite3.0 experimentally validated cell-penetrating peptide annotation.
Natural residues Linear L
IVT-mRNAs for CARA and CARB
Membrane
In vitro
CCTTSSCCCCC
Additional Detail Fields 1 fields
CCTTSSCCCCC