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Peptide record

TPDB87823

succinyl-alanine-proline-alanine-4-amino-7-methyl-coumarin (Suc-Ala-Pro-Ala-AMC) Selfassembly modified_plain modified
3 amino acids
Basic Information
TPDB87823
succinyl-alanine-proline-alanine-4-amino-7-methyl-coumarin (Suc-Ala-Pro-Ala-AMC)
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 3-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
Suc-APA-AMC
Physicochemical Analysis
C28H48N8O10S3
RNDEQGHILKFTWYV
A
752.92
5.18
0
0
4
-0
-0.64
0.900
27.27
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
125
16.60
3
Residue Composition
number
3
A
0
R
0
N
0
D
2
C
0
E
0
Q
0
G
0
H
0
I
0
L
0
K
1
M
0
F
1
P
1
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 3 R: 0 N: 0 D: 0 C: 2 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 1 F: 0 P: 1 S: 1 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
3
C28H48N8O10S3
752.92
5.18
-0
-0.64
0.900
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

27792201
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Aerogel
pH: 7.4 temperature: 37 °C solvent: Phosphate buffer solution (PBS) concentration: 100 μL
Selfassembly; Nanostructure=Aerogel; Trigger=pH: 7.4; temperature: 37 °C; solvent: Phosphate buffer solution (PBS); concentration: 100 μL
Scanning Electron Microscopy (SEM)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Aerogel Trigger=pH: 7.4 temperature: 37 °C solvent: Phosphate buffer solution (PBS) concentration: 100 μL
Aerogel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Suc C-terminal: AMC
pH: 7.4 temperature: 37 °C solvent: Phosphate buffer solution (PBS) concentration: 100 μL
Scanning Electron Microscopy (SEM)
27792201
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1885 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Additional Detail Fields 5 fields
pH: 7.4 temperature: 37 °C solvent: Phosphate buffer solution (PBS) concentration: 100 μL
N-terminal: Suc C-terminal: AMC
SAPdb ID 1885 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
27792201
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly