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Peptide record

TPDB87800

Fmoc-GF FmocGF Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87800
Fmoc-GF FmocGF
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]-GF
Physicochemical Analysis
C143H207N39O37S4
DQIKPSWV
RNLFY
3192.70
8.26
4
2
12
+1
-0.16
-0.200
28.86
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
4595
143.92
9
Residue Composition
number
1
A
3
R
3
N
0
D
2
C
2
E
0
Q
1
G
1
H
0
I
3
L
0
K
2
M
3
F
0
P
0
S
1
T
0
W
3
Y
0
V
Amino Acid Distribution
A: 1 R: 3 N: 3 D: 0 C: 2 E: 2 Q: 0 G: 1 H: 1 I: 0 L: 3 K: 0 M: 2 F: 3 P: 0 S: 0 T: 1 W: 0 Y: 3 V: 0
Chemical Descriptors
2
C143H207N39O37S4
3192.70
8.26
+1
-0.16
-0.200
Self-Assembly Information 2 records
Record 1 Selfassembly

Source

19705843
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Microtube
pH: < 6.5 temperature: Room temperature solvent: Water concentration: 5mg/ml
Selfassembly; Nanostructure=Microtube; Trigger=pH: < 6.5; temperature: Room temperature; solvent: Water; concentration: 5mg/ml
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy)
Selfassembly
Record 2 Selfassembly

Source

21995651
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Sheet like structure
pH: 4.4 - 7.3 temperature: Intial boiling to 75 -80 °C heating for 2 minutes and followed by cooling at 4 °C solvent: Water + Sodium hydroxide + HCl concentration: 1- 20 mmlol/L
Selfassembly; Nanostructure=Sheet like structure; Trigger=pH: 4.4 - 7.3; temperature: Intial boiling to 75 -80 °C heating for 2 minutes and followed by cooling at 4 °C; solvent: Water + Sodium hydroxide + HCl; concentration: 1- 20 mmlol/L
Transmission Electron Microscopy (TEM)
Selfassembly
Evidence Records 2 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Microtube Trigger=pH: < 6.5 temperature: Room temperature solvent: Water concentration: 5mg/ml
Microtube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
pH: < 6.5 temperature: Room temperature solvent: Water concentration: 5mg/ml
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy)
19705843
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1272 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Sheet like structure Trigger=pH: 4.4 - 7.3 temperature: Intial boiling to 75 -80 °C heating for 2 minutes and followed by cooling at 4 °C solvent: Water + Sodium hydroxide + HCl concentration: 1- 20 mmlol/L
Sheet like structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
pH: 4.4 - 7.3 temperature: Intial boiling to 75 -80 °C heating for 2 minutes and followed by cooling at 4 °C solvent: Water + Sodium hydroxide + HCl concentration: 1- 20 mmlol/L
Transmission Electron Microscopy (TEM)
21995651
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1578 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Additional Detail Fields 5 fields
pH: < 6.5 temperature: Room temperature solvent: Water concentration: 5mg/ml pH: 4.4 - 7.3 temperature: Intial boiling to 75 -80 °C heating for 2 minutes and followed by cooling at 4 °C solvent: Water + Sodium hydroxide + HCl concentration: 1- 20 mmlol/L
N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
SAPdb ID 1272 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row. SAPdb ID 1578
19705843 21995651
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly