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Peptide record

TPDB87765

N-3β-(4-t-Butylbenzoylamine)-(7α,12α-dihydroxy-5β-cholan-24- oyl)-(S)-arginine-(S)-glycine-(S)-a Selfassembly modified_plain modified
3 amino acids
Basic Information
TPDB87765
N-3β-(4-t-Butylbenzoylamine)-(7α,12α-dihydroxy-5β-cholan-24- oyl)-(S)-arginine-(S)-glycine-(S)-a
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 3-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
RGD-tbutPhC
Physicochemical Analysis
C34H55N13O13S1
ANEQILKMFSWYV
T
885.95
7.16
2
1
0
+0
3.50
-1.100
0.00
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
0
0.00
3
Residue Composition
number
0
A
1
R
0
N
1
D
1
C
0
E
0
Q
1
G
1
H
0
I
0
L
0
K
0
M
0
F
1
P
0
S
2
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 1 C: 1 E: 0 Q: 0 G: 1 H: 1 I: 0 L: 0 K: 0 M: 0 F: 0 P: 1 S: 0 T: 2 W: 0 Y: 0 V: 0
Chemical Descriptors
3
C34H55N13O13S1
885.95
7.16
+0
3.50
-1.100
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

28787634
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
long twisted ribbons
pH: 10 solvent: sodium carbonate/bicarbonate buffers concentration: 5.0 x 10-3 M
Selfassembly; Nanostructure=long twisted ribbons; Trigger=pH: 10; solvent: sodium carbonate/bicarbonate buffers; concentration: 5.0 x 10-3 M
circular dichroism (CD), UV absorption spectroscopy, cryogenic transmission electron microscopy (cryo-TEM), small angle X-ray scattering (SAXS) and static light scattering (SLS)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=long twisted ribbons Trigger=pH: 10 solvent: sodium carbonate/bicarbonate buffers concentration: 5.0 x 10-3 M
long twisted ribbons

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

C-terminal: tbutPhC
pH: 10 solvent: sodium carbonate/bicarbonate buffers concentration: 5.0 x 10-3 M
circular dichroism (CD), UV absorption spectroscopy, cryogenic transmission electron microscopy (cryo-TEM), small angle X-ray scattering (SAXS) and static light scattering (SLS)
28787634
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 10 solvent: sodium carbonate/bicarbonate buffers concentration: 5.0 x 10-3 M
C-terminal: tbutPhC
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
28787634
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly