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Peptide record

TPDB87666

Fmoc-FFD Fmoc-Phe-Phe-Asp-OH Selfassembly modified_plain modified
3 amino acids
Basic Information
TPDB87666
Fmoc-FFD Fmoc-Phe-Phe-Asp-OH
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
modified_plain
Yes
A 3-aa modified selfassembly peptide sequence curated from SAPdb, without an available 3D structural model.
Modified, details unspecified
Sequence
Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]-FFD
Physicochemical Analysis
C154H218N40O40S4
QGIKPSWV
F
3397.91
7.00
4
3
13
+0
-0.07
-0.202
28.22
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
4595
135.23
9
Residue Composition
number
1
A
3
R
3
N
1
D
2
C
2
E
0
Q
0
G
1
H
0
I
3
L
0
K
2
M
4
F
0
P
0
S
1
T
0
W
3
Y
0
V
Amino Acid Distribution
A: 1 R: 3 N: 3 D: 1 C: 2 E: 2 Q: 0 G: 0 H: 1 I: 0 L: 3 K: 0 M: 2 F: 4 P: 0 S: 0 T: 1 W: 0 Y: 3 V: 0
Chemical Descriptors
3
C154H218N40O40S4
3397.91
7.00
+0
-0.07
-0.202
Self-Assembly Information 2 records
Record 1 Selfassembly

Source

30267640
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber nanofibers
pH: 5-7 temperature: Room temperature solvent: TDA (75% in isopropanol) (145.75 μL) concentration: 8 mM
Selfassembly; Nanostructure=Nanofiber; nanofibers; Trigger=pH: 5-7; temperature: Room temperature; solvent: TDA (75% in isopropanol) (145.75 μL); concentration: 8 mM
TEM,SEM, CD and XRD
Selfassembly
Record 2 Selfassembly

Source

30452865
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber nanofibril
pH: 6 temperature: Room temperature concentration: 2 mM
Selfassembly; Nanostructure=Nanofiber; nanofibril; Trigger=pH: 6; temperature: Room temperature; concentration: 2 mM
Scanning electron microscopy (SEM), atomic force microscopy (AFM) and transmission electron microscopy (TEM)
Selfassembly
Evidence Records 2 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber nanofibers Trigger=pH: 5-7 temperature: Room temperature solvent: TDA (75% in isopropanol) (145.75 μL) concentration: 8 mM
Nanofiber nanofibers

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
pH: 5-7 temperature: Room temperature solvent: TDA (75% in isopropanol) (145.75 μL) concentration: 8 mM
TEM,SEM, CD and XRD
30267640
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber nanofibril Trigger=pH: 6 temperature: Room temperature concentration: 2 mM
Nanofiber nanofibril

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
pH: 6 temperature: Room temperature concentration: 2 mM
Scanning electron microscopy (SEM), atomic force microscopy (AFM) and transmission electron microscopy (TEM)
30452865
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 5-7 temperature: Room temperature solvent: TDA (75% in isopropanol) (145.75 μL) concentration: 8 mM pH: 6 concentration: 2 mM
N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
30267640 30452865
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly