Back to search

Peptide record

TPDB87657

cyclic dipeptides (CDPs) Selfassembly standard
2 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB87657
cyclic dipeptides (CDPs)
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
standard
No
A 2-aa standard natural selfassembly peptide sequence curated from SAPdb, with an available 3D structural model.
Sequence
SS
Physicochemical Analysis
C6H12N2O5
ARNDCEQGHILKMFPTWYV
S
192.17
6.02
0
0
0
-0
0.26
-0.800
0.00
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
2
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
0
L
0
K
0
M
0
F
0
P
2
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
2
C6H12N2O5
192.17
6.02
-0
0.26
-0.800
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

29933690
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube nanotubes
temperature: Room temperature solvent: chloroform and methanol concentration: 100 mmolâ‹…L-1
Selfassembly; Nanostructure=Nanotube; nanotubes; Trigger=temperature: Room temperature; solvent: chloroform and methanol; concentration: 100 mmolâ‹…L-1
SEM and TEM
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube nanotubes Trigger=temperature: Room temperature solvent: chloroform and methanol concentration: 100 mmolâ‹…L-1
Nanotube nanotubes

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: chloroform and methanol concentration: 100 mmolâ‹…L-1
SEM and TEM
29933690
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
temperature: Room temperature solvent: chloroform and methanol concentration: 100 mmolâ‹…L-1
None specified
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
29933690
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly