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Peptide record

TPDB87650

D-enantiomer of alanine containing tripeptides Selfassembly standard
6 amino acids
Basic Information
3D PDB MODEL
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TPDB87650
D-enantiomer of alanine containing tripeptides
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
standard
No
A 6-aa standard natural selfassembly peptide sequence curated from SAPdb, with an available 3D structural model.
Sequence
NapDFUDF
Physicochemical Analysis
C38H48N8O13
RCEQGHILKMSTWYV
DF
824.85
2.92
0
2
3
-2
0.90
-0.588
12.50
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
0
0.00
1
Residue Composition
number
1
A
0
R
1
N
2
D
0
C
0
E
0
Q
0
G
0
H
0
I
0
L
0
K
0
M
2
F
1
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 0 N: 1 D: 2 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 2 P: 1 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
6
C38H48N8O13
824.85
2.92
-2
0.90
-0.588
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

29883568
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanostructure nanostructures
pH: 7.4 temperature: 37°C solvent: 2-chlorotrityl chloride resin concentration: 0.25 wt%
Selfassembly; Nanostructure=Nanostructure; nanostructures; Trigger=pH: 7.4; temperature: 37°C; solvent: 2-chlorotrityl chloride resin; concentration: 0.25 wt%
Circular Dichroism (CD)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanostructure nanostructures Trigger=pH: 7.4 temperature: 37°C solvent: 2-chlorotrityl chloride resin concentration: 0.25 wt%
Nanostructure nanostructures

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 7.4 temperature: 37°C solvent: 2-chlorotrityl chloride resin concentration: 0.25 wt%
Circular Dichroism (CD)
29883568
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 7.4 temperature: 37°C solvent: 2-chlorotrityl chloride resin concentration: 0.25 wt%
None specified
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
29883568
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly