Back to search

Peptide record

TPDB87639

NDI- and Py-FF Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87639
NDI- and Py-FF
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
pyrene (Py-1, donor) or napHthalene diimide (NDI-1, acceptor)-FF
Physicochemical Analysis
C216H323N63O72S3
QGKSWV
E
5050.50
4.27
6
10
13
-6
19.22
-0.744
35.16
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
3105
61.48
11
Residue Composition
number
3
A
4
R
5
N
4
D
2
C
6
E
0
Q
0
G
2
H
4
I
1
L
0
K
1
M
2
F
4
P
0
S
2
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 3 R: 4 N: 5 D: 4 C: 2 E: 6 Q: 0 G: 0 H: 2 I: 4 L: 1 K: 0 M: 1 F: 2 P: 4 S: 0 T: 2 W: 0 Y: 2 V: 0
Chemical Descriptors
2
C216H323N63O72S3
5050.50
4.27
-6
19.22
-0.744
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

29266567
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
temperature: Room temperature solvent: toluene, ODCB, ethyl acetate, and methanol concentration: 0.5–1 wt%
Selfassembly; Nanostructure=Nanotube; Trigger=temperature: Room temperature; solvent: toluene, ODCB, ethyl acetate, and methanol; concentration: 0.5–1 wt%
UV/Vis spectroscopy and transmission electron microscopy (TEM)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=temperature: Room temperature solvent: toluene, ODCB, ethyl acetate, and methanol concentration: 0.5–1 wt%
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: pyrene (Py-1, donor) or napHthalene diimide (NDI-1, acceptor)
temperature: Room temperature solvent: toluene, ODCB, ethyl acetate, and methanol concentration: 0.5–1 wt%
UV/Vis spectroscopy and transmission electron microscopy (TEM)
29266567
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
temperature: Room temperature solvent: toluene, ODCB, ethyl acetate, and methanol concentration: 0.5–1 wt%
N-terminal: pyrene (Py-1, donor) or napHthalene diimide (NDI-1, acceptor)
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
29266567
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly