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Peptide record

TPDB87638

Fmoc-YA Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87638
Fmoc-YA
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]-YA
Physicochemical Analysis
C144H209N39O38S4
DQGIKPSWV
Y
3222.72
8.25
4
2
13
+1
-0.15
-0.243
31.14
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
6085
188.82
10
Residue Composition
number
2
A
3
R
3
N
0
D
2
C
2
E
0
Q
0
G
1
H
0
I
3
L
0
K
2
M
2
F
0
P
0
S
1
T
0
W
4
Y
0
V
Amino Acid Distribution
A: 2 R: 3 N: 3 D: 0 C: 2 E: 2 Q: 0 G: 0 H: 1 I: 0 L: 3 K: 0 M: 2 F: 2 P: 0 S: 0 T: 1 W: 0 Y: 4 V: 0
Chemical Descriptors
2
C144H209N39O38S4
3222.72
8.25
+1
-0.15
-0.243
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

24896538
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Gel (consist of Fibrous network)
pH: 8 temperature: Room temperature solvent: Phosphate buffer concentration: 10mM
Selfassembly; Nanostructure=Hydrogel; Gel (consist of Fibrous network); Trigger=pH: 8; temperature: Room temperature; solvent: Phosphate buffer; concentration: 10mM
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Gel (consist of Fibrous network) Trigger=pH: 8 temperature: Room temperature solvent: Phosphate buffer concentration: 10mM
Hydrogel Gel (consist of Fibrous network)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
pH: 8 temperature: Room temperature solvent: Phosphate buffer concentration: 10mM
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
24896538
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 8 temperature: Room temperature solvent: Phosphate buffer concentration: 10mM
N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
24896538
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly