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Peptide record

TPDB87619

Dipeptide 2 Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87619
Dipeptide 2
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]-FY
Physicochemical Analysis
C150H213N39O38S4
DQGIKPSWV
Y
3298.82
8.25
4
2
13
+1
-1.11
-0.220
28.86
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
6085
184.46
10
Residue Composition
number
1
A
3
R
3
N
0
D
2
C
2
E
0
Q
0
G
1
H
0
I
3
L
0
K
2
M
3
F
0
P
0
S
1
T
0
W
4
Y
0
V
Amino Acid Distribution
A: 1 R: 3 N: 3 D: 0 C: 2 E: 2 Q: 0 G: 0 H: 1 I: 0 L: 3 K: 0 M: 2 F: 3 P: 0 S: 0 T: 1 W: 0 Y: 4 V: 0
Chemical Descriptors
2
C150H213N39O38S4
3298.82
8.25
+1
-1.11
-0.220
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

21107375
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Transparent gel
pH: 8 temperature: Intial 55 °C heating for 1 hour and followed by cooling at room temperature solvent: Sodium phosphate buffer (pH 8) concentration: 10 mmol/kg
Selfassembly; Nanostructure=Hydrogel; Transparent gel; Trigger=pH: 8; temperature: Intial 55 °C heating for 1 hour and followed by cooling at room temperature; solvent: Sodium phosphate buffer (pH 8); concentration: 10 mmol/kg
AFM (Atomic Force Microscopy) and DLS (Dynamic Light Scattering)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Transparent gel Trigger=pH: 8 temperature: Intial 55 °C heating for 1 hour and followed by cooling at room temperature solvent: Sodium phosphate buffer (pH 8) concentration: 10 mmol/kg
Hydrogel Transparent gel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
pH: 8 temperature: Intial 55 °C heating for 1 hour and followed by cooling at room temperature solvent: Sodium phosphate buffer (pH 8) concentration: 10 mmol/kg
AFM (Atomic Force Microscopy) and DLS (Dynamic Light Scattering)
21107375
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 8 temperature: Intial 55 °C heating for 1 hour and followed by cooling at room temperature solvent: Sodium phosphate buffer (pH 8) concentration: 10 mmol/kg
N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
21107375
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly