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Peptide record

TPDB87618

Fmoc-Val-Asp Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87618
Fmoc-Val-Asp
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]-VD
Physicochemical Analysis
C141H209N39O39S4
QGIKPSW
RNLY
3202.69
7.00
4
3
12
+0
2.26
-0.239
35.45
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
4595
143.47
9
Residue Composition
number
1
A
3
R
3
N
1
D
2
C
2
E
0
Q
0
G
1
H
0
I
3
L
0
K
2
M
2
F
0
P
0
S
1
T
0
W
3
Y
1
V
Amino Acid Distribution
A: 1 R: 3 N: 3 D: 1 C: 2 E: 2 Q: 0 G: 0 H: 1 I: 0 L: 3 K: 0 M: 2 F: 2 P: 0 S: 0 T: 1 W: 0 Y: 3 V: 1
Chemical Descriptors
2
C141H209N39O39S4
3202.69
7.00
+0
2.26
-0.239
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

20945315
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Transparent hydrogel (consists of fibers)
pH: 7.46 temperature: Room temperature solvent: DMSO + water concentration: 0.2 w/v
Selfassembly; Nanostructure=Hydrogel; Transparent hydrogel (consists of fibers); Trigger=pH: 7.46; temperature: Room temperature; solvent: DMSO + water; concentration: 0.2 w/v
FE - SEM (Field Emission Scanning Electron Microscopy), Transmission Electron Microscopy (TEM) and AFM (Atomic Force microscopy)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Transparent hydrogel (consists of fibers) Trigger=pH: 7.46 temperature: Room temperature solvent: DMSO + water concentration: 0.2 w/v
Hydrogel Transparent hydrogel (consists of fibers)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
pH: 7.46 temperature: Room temperature solvent: DMSO + water concentration: 0.2 w/v
FE - SEM (Field Emission Scanning Electron Microscopy), Transmission Electron Microscopy (TEM) and AFM (Atomic Force microscopy)
20945315
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 7.46 temperature: Room temperature solvent: DMSO + water concentration: 0.2 w/v
N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
20945315
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly