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Peptide record

TPDB87615

Dipeptide 12 Dipeptide 13 Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87615
Dipeptide 12 Dipeptide 13
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
Bromo-Napthalene or napthalene derivative-FF
Physicochemical Analysis
C174H272N52O57S1
CQGKSWY
E
4036.45
4.58
5
7
14
-4
15.76
-0.505
60.00
Mammalian: Yeast: E.coli:
0
0.00
7
Residue Composition
number
5
A
3
R
4
N
1
D
0
C
6
E
0
Q
0
G
2
H
2
I
2
L
0
K
1
M
2
F
2
P
0
S
3
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 5 R: 3 N: 4 D: 1 C: 0 E: 6 Q: 0 G: 0 H: 2 I: 2 L: 2 K: 0 M: 1 F: 2 P: 2 S: 0 T: 3 W: 0 Y: 0 V: 2
Chemical Descriptors
2
C174H272N52O57S1
4036.45
4.58
-4
15.76
-0.505
Self-Assembly Information 2 records
Record 1 Selfassembly

Source

20695592
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Transparent gel
pH: 3.4 +/- 0.2. temperature: Room temperature solvent: Water + NaOH + 8.75 mg/ml GdL(glucono-delta-lactone) concentration: 0.5%wt
Selfassembly; Nanostructure=Hydrogel; Transparent gel; Trigger=pH: 3.4 +/- 0.2.; temperature: Room temperature; solvent: Water + NaOH + 8.75 mg/ml GdL(glucono-delta-lactone); concentration: 0.5%wt
Transmission Electron Microscopy (TEM)
Selfassembly
Record 2 Selfassembly

Source

20695592
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Turbid Gel
pH: 3.4 +/- 0.2. temperature: Room temperature solvent: Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL) concentration: 0.5 wt%
Selfassembly; Nanostructure=Turbid Gel; Trigger=pH: 3.4 +/- 0.2.; temperature: Room temperature; solvent: Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL); concentration: 0.5 wt%
Transmission Electron Microscopy (TEM)
Selfassembly
Evidence Records 2 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Transparent gel Trigger=pH: 3.4 +/- 0.2. temperature: Room temperature solvent: Water + NaOH + 8.75 mg/ml GdL(glucono-delta-lactone) concentration: 0.5%wt
Hydrogel Transparent gel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Bromo-Napthalene or napthalene derivative
pH: 3.4 +/- 0.2. temperature: Room temperature solvent: Water + NaOH + 8.75 mg/ml GdL(glucono-delta-lactone) concentration: 0.5%wt
Transmission Electron Microscopy (TEM)
20695592
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Turbid Gel Trigger=pH: 3.4 +/- 0.2. temperature: Room temperature solvent: Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL) concentration: 0.5 wt%
Turbid Gel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Bromo-Napthalene or napthalene derivative
pH: 3.4 +/- 0.2. temperature: Room temperature solvent: Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL) concentration: 0.5 wt%
Transmission Electron Microscopy (TEM)
20695592
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1247 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Additional Detail Fields 5 fields
pH: 3.4 +/- 0.2. temperature: Room temperature solvent: Water + NaOH + 8.75 mg/ml GdL(glucono-delta-lactone) concentration: 0.5%wt solvent: Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL) concentration: 0.5 wt%
N-terminal: Bromo-Napthalene or napthalene derivative
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database. SAPdb ID 1247 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
20695592
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly