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Peptide record

TPDB87612

Hydrogelator 4 (Nap-L-fPhe-L-fPhe) Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87612
Hydrogelator 4 (Nap-L-fPhe-L-fPhe)
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb, without an available 3D structural model.
Modified, details unspecified
Sequence
Napthalene-fPhe-fPhe-fPhe= 4-fluorophenylalanine
Physicochemical Analysis
C207H290N56O60
DCQGKMSWV
E
4522.92
4.87
6
7
14
-6
15.55
-0.717
48.96
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
1490
32.94
7
Residue Composition
number
4
A
1
R
5
N
0
D
0
C
7
E
0
Q
0
G
5
H
1
I
4
L
0
K
0
M
4
F
5
P
0
S
1
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 4 R: 1 N: 5 D: 0 C: 0 E: 7 Q: 0 G: 0 H: 5 I: 1 L: 4 K: 0 M: 0 F: 4 P: 5 S: 0 T: 1 W: 0 Y: 1 V: 0
Chemical Descriptors
2
C207H290N56O60
4522.92
4.87
-6
15.55
-0.717
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

20050040
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Dense Gel consists of fibrils with width: 20-150nm
pH: 7.8 temperature: Room temperature solvent: Water concentration: 10mg/ml
Selfassembly; Nanostructure=Hydrogel; Dense Gel consists of fibrils with width: 20-150nm; Trigger=pH: 7.8; temperature: Room temperature; solvent: Water; concentration: 10mg/ml
Transmission Electron Microscopy (TEM)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Dense Gel consists of fibrils with width: 20-150nm Trigger=pH: 7.8 temperature: Room temperature solvent: Water concentration: 10mg/ml
Hydrogel Dense Gel consists of fibrils with width: 20-150nm

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Napthalene Other: fPhe= 4-fluorophenylalanine
pH: 7.8 temperature: Room temperature solvent: Water concentration: 10mg/ml
Transmission Electron Microscopy (TEM)
20050040
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 7.8 temperature: Room temperature solvent: Water concentration: 10mg/ml
N-terminal: Napthalene Other: fPhe= 4-fluorophenylalanine
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
20050040
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly