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Peptide record

TPDB87611

Hydrogelator 3 (racemic Nap-beta-3-HPhg-beta3-HPhg) Selfassembly modified_plain modified
4 amino acids
Basic Information
TPDB87611
Hydrogelator 3 (racemic Nap-beta-3-HPhg-beta3-HPhg)
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
modified_plain
Yes
A 4-aa modified selfassembly peptide sequence curated from SAPdb, without an available 3D structural model.
Modified, details unspecified
Sequence
Napthalene-beta-3-HPhg-beta3-HPhg-s-beta3 -HPhg: s-beta3 -H-phenylglycine
Physicochemical Analysis
C232H334N72O80S1
RDQKMFWV
H
5443.70
5.34
9
8
12
-7
24.60
-0.807
29.59
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
2980
54.74
14
Residue Composition
number
6
A
0
R
4
N
0
D
1
C
8
E
0
Q
4
G
9
H
1
I
3
L
0
K
0
M
0
F
5
P
2
S
5
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 6 R: 0 N: 4 D: 0 C: 1 E: 8 Q: 0 G: 4 H: 9 I: 1 L: 3 K: 0 M: 0 F: 0 P: 5 S: 2 T: 5 W: 0 Y: 2 V: 0
Chemical Descriptors
4
C232H334N72O80S1
5443.70
5.34
-7
24.60
-0.807
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

20050040
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Porous Gel consist of Irregular fibers
pH: 7.1 temperature: Room temperature solvent: Water concentration: 10mg/ml
Selfassembly; Nanostructure=Hydrogel; Porous Gel consist of Irregular fibers; Trigger=pH: 7.1; temperature: Room temperature; solvent: Water; concentration: 10mg/ml
Transmission Electron Microscopy (TEM)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Porous Gel consist of Irregular fibers Trigger=pH: 7.1 temperature: Room temperature solvent: Water concentration: 10mg/ml
Hydrogel Porous Gel consist of Irregular fibers

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Napthalene Other: s-beta3 -HPhg: s-beta3 -H-phenylglycine
pH: 7.1 temperature: Room temperature solvent: Water concentration: 10mg/ml
Transmission Electron Microscopy (TEM)
20050040
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 7.1 temperature: Room temperature solvent: Water concentration: 10mg/ml
N-terminal: Napthalene Other: s-beta3 -HPhg: s-beta3 -H-phenylglycine
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
20050040
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly