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Peptide record

TPDB87599

Peptide 1 or H-Phe(4-azido)-Phe(4-azido)-OH Peptide 1 or H-Phe(4-azido)-Phe(4-azido)-OH + Peptide 4 or H-Phe-Phe-OH Peptide 1 or H-Phe(4-azido)-Phe(4-azido)-OH + Peptide 5 or Boc-Phe-Phe-OH Peptide 2 or H-Phe-Phe(4-azido)-OH + Peptide 5 or Boc-Phe-Phe-OH Peptide 3 or H-Phe(4-azido)-Phe-OH + Peptide 5 or Boc-Phe-Phe-OH Peptide 3 or H-Phe(4-azido)-Phe-OH+ Peptide 4 or H-Phe-Phe-OH + Peptide 5 or Boc-Phe-Phe-OH Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87599
Peptide 1 or H-Phe(4-azido)-Phe(4-azido)-OH Peptide 1 or H-Phe(4-azido)-Phe(4-azido)-OH + Peptide 4 or H-Phe-Phe-OH Peptide 1 or H-Phe(4-azido)-Phe(4-azido)-OH + Peptide 5 or Boc-Phe-Phe-OH Peptide 2 or H-Phe-Phe(4-azido)-OH + Peptide 5 or Boc-Phe-Phe-OH Peptide 3 or H-Phe(4-azido)-Phe-OH + Peptide 5 or Boc-Phe-Phe-OH Peptide 3 or H-Phe(4-azido)-Phe-OH+ Peptide 4 or H-Phe-Phe-OH + Peptide 5 or Boc-Phe-Phe-OH
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
4-azido-FF-4-azido
Physicochemical Analysis
C44H62N8O13
RNCEQGHLKMPSTWYV
ADIF
911.02
2.92
0
2
6
-2
-0.76
0.622
54.44
Mammalian: Yeast: E.coli:
0
0.00
0
Residue Composition
number
2
A
0
R
0
N
2
D
0
C
0
E
0
Q
0
G
0
H
2
I
0
L
0
K
0
M
2
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 2 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 2 L: 0 K: 0 M: 0 F: 2 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
2
C44H62N8O13
911.02
2.92
-2
-0.76
0.622
Self-Assembly Information 7 records
Record 1 Selfassembly

Source

24889029
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanosphere Fused and flat spheres
temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 2, and 3mg/ml of peptide 5
Selfassembly; Nanostructure=Nanosphere; Fused and flat spheres; Trigger=temperature: Room temperature; solvent: 50% ethanol; concentration: 5mg/ml of peptide 2, and 3mg/ml of peptide 5
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
Selfassembly
Record 2 Selfassembly

Source

24889029
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Spherical and porous structure
temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml
Selfassembly; Nanostructure=Spherical and porous structure; Trigger=temperature: Room temperature; solvent: 50% ethanol; concentration: 5mg/ml
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
Selfassembly
Record 3 Selfassembly

Source

24889029
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Aggregate of spherical assemblies
temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 5
Selfassembly; Nanostructure=Aggregate of spherical assemblies; Trigger=temperature: Room temperature; solvent: 50% ethanol; concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 5
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
Selfassembly
Record 4 Selfassembly

Source

24889029
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Aggregate of spherical assemblies
temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 4
Selfassembly; Nanostructure=Aggregate of spherical assemblies; Trigger=temperature: Room temperature; solvent: 50% ethanol; concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 4
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
Selfassembly
Record 5 Selfassembly

Source

24889029
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Aggregate of tubular structure
temperature: Room temperature solvent: TDW (Tripple Distilled Water) concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 4
Selfassembly; Nanostructure=Aggregate of tubular structure; Trigger=temperature: Room temperature; solvent: TDW (Tripple Distilled Water); concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 4
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
Selfassembly
Record 6 Selfassembly

Source

24889029
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Aggregate of tubular structure
temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 3, and 3mg/ml of peptide 5
Selfassembly; Nanostructure=Aggregate of tubular structure; Trigger=temperature: Room temperature; solvent: 50% ethanol; concentration: 5mg/ml of peptide 3, and 3mg/ml of peptide 5
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
Selfassembly
Record 7 Selfassembly

Source

24889029
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Necklace like Nanostructure
temperature: Room temperature solvent: 50% ethanol concentration: 0.3mg/ml, 5mg/ml of peptide 4, and 3mg/ml of peptide 5
Selfassembly; Nanostructure=Necklace like Nanostructure; Trigger=temperature: Room temperature; solvent: 50% ethanol; concentration: 0.3mg/ml, 5mg/ml of peptide 4, and 3mg/ml of peptide 5
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
Selfassembly
Evidence Records 7 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanosphere Fused and flat spheres Trigger=temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 2, and 3mg/ml of peptide 5
Nanosphere Fused and flat spheres

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: 4-azido C-terminal: 4-azido
temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 2, and 3mg/ml of peptide 5
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
24889029
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Spherical and porous structure Trigger=temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml
Spherical and porous structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: 4-azido C-terminal: 4-azido
temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
24889029
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1456 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 3 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Aggregate of spherical assemblies Trigger=temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 5
Aggregate of spherical assemblies

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: 4-azido C-terminal: 4-azido
temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 5
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
24889029
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1462 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 4 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Aggregate of spherical assemblies Trigger=temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 4
Aggregate of spherical assemblies

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: 4-azido C-terminal: 4-azido
temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 4
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
24889029
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1463 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 5 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Aggregate of tubular structure Trigger=temperature: Room temperature solvent: TDW (Tripple Distilled Water) concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 4
Aggregate of tubular structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: 4-azido C-terminal: 4-azido
temperature: Room temperature solvent: TDW (Tripple Distilled Water) concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 4
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
24889029
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1464 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 6 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Aggregate of tubular structure Trigger=temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 3, and 3mg/ml of peptide 5
Aggregate of tubular structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: 4-azido C-terminal: 4-azido
temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 3, and 3mg/ml of peptide 5
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
24889029
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1465 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 7 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Necklace like Nanostructure Trigger=temperature: Room temperature solvent: 50% ethanol concentration: 0.3mg/ml, 5mg/ml of peptide 4, and 3mg/ml of peptide 5
Necklace like Nanostructure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: 4-azido C-terminal: 4-azido
temperature: Room temperature solvent: 50% ethanol concentration: 0.3mg/ml, 5mg/ml of peptide 4, and 3mg/ml of peptide 5
HR - SEM (High Resolution - Scanning Electron Microscopy), STEM (Scanning Transmission Electron Microscopy) and AFM (Atomic Force Microscopy)
24889029
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1467 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Additional Detail Fields 5 fields
temperature: Room temperature solvent: 50% ethanol concentration: 5mg/ml of peptide 2, and 3mg/ml of peptide 5 concentration: 5mg/ml concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 5 concentration: 5mg/ml of peptide 1, and 3mg/ml of peptide 4 solvent: TDW (Tripple Distilled Water) concentration: 5mg/ml of peptide 3, and 3mg/ml of peptide 5 concentration: 0.3mg/ml, 5mg/ml of peptide 4, and 3mg/ml of peptide 5
N-terminal: 4-azido C-terminal: 4-azido
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database. SAPdb ID 1456 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row. SAPdb ID 1462 SAPdb ID 1463 SAPdb ID 1464 SAPdb ID 1465 SAPdb ID 1467
24889029
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly