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Peptide record

TPDB87594

PBI-[GY]2 Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87594
PBI-[GY]2
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
Perylene bisimide-GY
Physicochemical Analysis
C91H139N21O32S1
ACQHKFTWV
E
2071.29
3.58
1
5
7
-4
7.53
-0.585
78.00
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
2980
143.87
4
Residue Composition
number
0
A
1
R
1
N
1
D
0
C
4
E
0
Q
1
G
0
H
3
I
1
L
0
K
1
M
0
F
1
P
1
S
0
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 1 D: 1 C: 0 E: 4 Q: 0 G: 1 H: 0 I: 3 L: 1 K: 0 M: 1 F: 0 P: 1 S: 1 T: 0 W: 0 Y: 2 V: 0
Chemical Descriptors
2
C91H139N21O32S1
2071.29
3.58
-4
7.53
-0.585
Self-Assembly Information 2 records
Record 1 Selfassembly

Source

24911955
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber Nanofibers
pH: 10.8 temperature: Room temperature solvent: Aqeous buffer concentration: 1 .5 x 10‚àí2 M
Selfassembly; Nanostructure=Nanofiber; Nanofibers; Trigger=pH: 10.8; temperature: Room temperature; solvent: Aqeous buffer; concentration: 1 .5 x 10‚àí2 M
AFM (Atomic Force Microscopy)
Selfassembly
Record 2 Selfassembly

Source

24911955
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Organogel
temperature: Room temperature solvent: DMF concentration: 5√ó 10‚àí3 M
Selfassembly; Nanostructure=Organogel; Trigger=temperature: Room temperature; solvent: DMF; concentration: 5√ó 10‚àí3 M
AFM (Atomic Force Microscopy)
Selfassembly
Evidence Records 2 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber Nanofibers Trigger=pH: 10.8 temperature: Room temperature solvent: Aqeous buffer concentration: 1 .5 x 10‚àí2 M
Nanofiber Nanofibers

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Perylene bisimide
pH: 10.8 temperature: Room temperature solvent: Aqeous buffer concentration: 1 .5 x 10‚àí2 M
AFM (Atomic Force Microscopy)
24911955
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Organogel Trigger=temperature: Room temperature solvent: DMF concentration: 5√ó 10‚àí3 M
Organogel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Perylene bisimide
temperature: Room temperature solvent: DMF concentration: 5√ó 10‚àí3 M
AFM (Atomic Force Microscopy)
24911955
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 10.8 temperature: Room temperature solvent: Aqeous buffer concentration: 1 .5 x 10‚àí2 M solvent: DMF concentration: 5√ó 10‚àí3 M
N-terminal: Perylene bisimide
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
24911955
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly