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Peptide record

TPDB87587

YN Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87587
YN
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]-YN
Physicochemical Analysis
C145H210N40O39S4
DQGIKPSWV
NY
3265.75
8.25
4
2
12
+1
0.44
-0.364
28.86
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
6085
186.33
11
Residue Composition
number
1
A
3
R
4
N
0
D
2
C
2
E
0
Q
0
G
1
H
0
I
3
L
0
K
2
M
2
F
0
P
0
S
1
T
0
W
4
Y
0
V
Amino Acid Distribution
A: 1 R: 3 N: 4 D: 0 C: 2 E: 2 Q: 0 G: 0 H: 1 I: 0 L: 3 K: 0 M: 2 F: 2 P: 0 S: 0 T: 1 W: 0 Y: 4 V: 0
Chemical Descriptors
2
C145H210N40O39S4
3265.75
8.25
+1
0.44
-0.364
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

24256076
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Hydogel (consists of Nanofibers)
pH: 8 temperature: Room temperature solvent: 100mM Phosphate buffer concentration: 10mM
Selfassembly; Nanostructure=Hydrogel; Hydogel (consists of Nanofibers); Trigger=pH: 8; temperature: Room temperature; solvent: 100mM Phosphate buffer; concentration: 10mM
AFM (Atomic Force Microscopy, Fluorescence Emission Spectroscopy and DLS (Dynamic Light Scattering)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Hydogel (consists of Nanofibers) Trigger=pH: 8 temperature: Room temperature solvent: 100mM Phosphate buffer concentration: 10mM
Hydrogel Hydogel (consists of Nanofibers)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
pH: 8 temperature: Room temperature solvent: 100mM Phosphate buffer concentration: 10mM
AFM (Atomic Force Microscopy, Fluorescence Emission Spectroscopy and DLS (Dynamic Light Scattering)
24256076
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 8 temperature: Room temperature solvent: 100mM Phosphate buffer concentration: 10mM
N-terminal: Fmoc [or N-(fluorenyl-9-methoxycarbonyl)]
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
24256076
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly