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Peptide record

TPDB87575

Arg-(alpha-beta-dehydroPhenylalanine) Arg-beta-dehydroPhenylalanine Selfassembly modified_plain modified
3 amino acids
Basic Information
TPDB87575
Arg-(alpha-beta-dehydroPhenylalanine) Arg-beta-dehydroPhenylalanine
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
modified_plain
Yes
A 3-aa modified selfassembly peptide sequence curated from SAPdb, without an available 3D structural model.
Modified, details unspecified
Sequence
R-Delta-F-Delta-F or Δphe=alpha-beta-dehydrophenylalanine
Physicochemical Analysis
C225H332N64O75
CQGKMSWV
AE
5133.50
4.35
7
11
17
-8
19.92
-0.743
52.41
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
2980
58.05
8
Residue Composition
number
7
A
3
R
3
N
4
D
0
C
7
E
0
Q
0
G
4
H
1
I
5
L
0
K
0
M
2
F
3
P
0
S
3
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 7 R: 3 N: 3 D: 4 C: 0 E: 7 Q: 0 G: 0 H: 4 I: 1 L: 5 K: 0 M: 0 F: 2 P: 3 S: 0 T: 3 W: 0 Y: 2 V: 0
Chemical Descriptors
3
C225H332N64O75
5133.50
4.35
-8
19.92
-0.743
Self-Assembly Information 2 records
Record 1 Selfassembly

Source

23398497
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanoparticle
temperature: Room temperature solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 1mg/ml
Selfassembly; Nanostructure=Nanoparticle; Trigger=temperature: Room temperature; solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water; concentration: 1mg/ml
Transmission Electron Microscopy (TEM)
Selfassembly
Record 2 Selfassembly

Source

22833945
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanovesicle Vesicle
temperature: Room temperature solvent: 1,1,1,3,3,3-hexa-fluoro-isopropanol/water. concentration: 0.1 - 1mg/ml
Selfassembly; Nanostructure=Nanovesicle; Vesicle; Trigger=temperature: Room temperature; solvent: 1,1,1,3,3,3-hexa-fluoro-isopropanol/water.; concentration: 0.1 - 1mg/ml
Transmission Electron Microscopy (TEM) and DLS (Dynamic Light scattering)
Selfassembly
Evidence Records 2 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanoparticle Trigger=temperature: Room temperature solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 1mg/ml
Nanoparticle

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

Other: Delta-F or Δphe=alpha-beta-dehydrophenylalanine
temperature: Room temperature solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 1mg/ml
Transmission Electron Microscopy (TEM)
23398497
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanovesicle Vesicle Trigger=temperature: Room temperature solvent: 1,1,1,3,3,3-hexa-fluoro-isopropanol/water. concentration: 0.1 - 1mg/ml
Nanovesicle Vesicle

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

Other: Delta-F or Δphe=alpha-beta-dehydrophenylalanine
temperature: Room temperature solvent: 1,1,1,3,3,3-hexa-fluoro-isopropanol/water. concentration: 0.1 - 1mg/ml
Transmission Electron Microscopy (TEM) and DLS (Dynamic Light scattering)
22833945
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
temperature: Room temperature solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 1mg/ml solvent: 1,1,1,3,3,3-hexa-fluoro-isopropanol/water. concentration: 0.1 - 1mg/ml
Other: Delta-F or Δphe=alpha-beta-dehydrophenylalanine
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
23398497 22833945
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly