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Peptide record

TPDB87543

Dipeptide 4 Naphthalene-alanylvaline Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87543
Dipeptide 4 Naphthalene-alanylvaline
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
Napthalene-AV
Physicochemical Analysis
C53H84N16O20
RDCQGIKMFSWY
A
1265.35
4.25
1
2
5
-2
5.43
-0.469
75.38
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
0
0.00
3
Residue Composition
number
3
A
0
R
2
N
0
D
0
C
2
E
0
Q
0
G
1
H
0
I
1
L
0
K
0
M
0
F
1
P
0
S
1
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 3 R: 0 N: 2 D: 0 C: 0 E: 2 Q: 0 G: 0 H: 1 I: 0 L: 1 K: 0 M: 0 F: 0 P: 1 S: 0 T: 1 W: 0 Y: 0 V: 1
Chemical Descriptors
2
C53H84N16O20
1265.35
4.25
-2
5.43
-0.469
Self-Assembly Information 2 records
Record 1 Selfassembly

Source

20695592
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Transparent Gel
pH: 3.4 +/- 0.2. temperature: Room temperature solvent: Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL) concentration: 0.5 wt%
Selfassembly; Nanostructure=Hydrogel; Transparent Gel; Trigger=pH: 3.4 +/- 0.2.; temperature: Room temperature; solvent: Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL); concentration: 0.5 wt%
Transmission Electron Microscopy (TEM)
Selfassembly
Record 2 Selfassembly

Source

19921840
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Hydrogel (Consist of Nanofibres)
pH: 3.1 - 5 temperature: Room temperature solvent: Water + glucono-Å’Â¥-lactone (GdL) concentration: 0.5 wt%
Selfassembly; Nanostructure=Hydrogel; Hydrogel (Consist of Nanofibres); Trigger=pH: 3.1 - 5; temperature: Room temperature; solvent: Water + glucono-Å’Â¥-lactone (GdL); concentration: 0.5 wt%
Transmission Electron Microscopy (TEM)
Selfassembly
Evidence Records 2 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Transparent Gel Trigger=pH: 3.4 +/- 0.2. temperature: Room temperature solvent: Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL) concentration: 0.5 wt%
Hydrogel Transparent Gel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Napthalene
pH: 3.4 +/- 0.2. temperature: Room temperature solvent: Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL) concentration: 0.5 wt%
Transmission Electron Microscopy (TEM)
20695592
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Hydrogel (Consist of Nanofibres) Trigger=pH: 3.1 - 5 temperature: Room temperature solvent: Water + glucono-Å’Â¥-lactone (GdL) concentration: 0.5 wt%
Hydrogel Hydrogel (Consist of Nanofibres)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Napthalene
pH: 3.1 - 5 temperature: Room temperature solvent: Water + glucono-Å’Â¥-lactone (GdL) concentration: 0.5 wt%
Transmission Electron Microscopy (TEM)
19921840
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 3.4 +/- 0.2. temperature: Room temperature solvent: Deionized water + 0.1 M Sodium hydroxide + glucono-Å’Â¥-lactone (GdL) concentration: 0.5 wt% pH: 3.1 - 5 solvent: Water + glucono-Å’Â¥-lactone (GdL)
N-terminal: Napthalene
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
20695592 19921840
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly