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Peptide record

TPDB87538

Compound B Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87538
Compound B
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
KK-Amidation
Physicochemical Analysis
C47H85N13O15S1
RCEQGHLFPSWYV
AIK
1104.33
9.88
2
1
5
+1
2.58
-0.083
81.67
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
2
Residue Composition
number
2
A
0
R
1
N
1
D
0
C
0
E
0
Q
0
G
0
H
2
I
0
L
2
K
1
M
0
F
0
P
0
S
1
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 2 R: 0 N: 1 D: 1 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 2 L: 0 K: 2 M: 1 F: 0 P: 0 S: 0 T: 1 W: 0 Y: 0 V: 0
Chemical Descriptors
2
C47H85N13O15S1
1104.33
9.88
+1
2.58
-0.083
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

25384556
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Nanotubes
pH: 7.4 temperature: 37 °C solvent: Water or Phosphate buffer saline concentration: Preincubation at 10mM for 24 h, 1mM for rest 48 hours
Selfassembly; Nanostructure=Nanotube; Nanotubes; Trigger=pH: 7.4; temperature: 37 °C; solvent: Water or Phosphate buffer saline; concentration: Preincubation at 10mM for 24 h, 1mM for rest 48 hours
Transmission Electron Microscopy (TEM)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Nanotubes Trigger=pH: 7.4 temperature: 37 °C solvent: Water or Phosphate buffer saline concentration: Preincubation at 10mM for 24 h, 1mM for rest 48 hours
Nanotube Nanotubes

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

C-terminal: Amidation
pH: 7.4 temperature: 37 °C solvent: Water or Phosphate buffer saline concentration: Preincubation at 10mM for 24 h, 1mM for rest 48 hours
Transmission Electron Microscopy (TEM)
25384556
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 7.4 temperature: 37 °C solvent: Water or Phosphate buffer saline concentration: Preincubation at 10mM for 24 h, 1mM for rest 48 hours
C-terminal: Amidation
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
25384556
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly