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Peptide record

TPDB87536

Peptide 2 Selfassembly modified_plain modified
7 amino acids
Basic Information
TPDB87536
Peptide 2
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
modified_plain
Yes
A 7-aa modified selfassembly peptide sequence curated from SAPdb, without an available 3D structural model.
Modified, details unspecified
Sequence
Boc (or t-butoxycarbonyl)-Boc-Aib-m-ABA-OMe-m-ABA=m-aminobenzoic acid; Aib=α-aminoisobutyric acid-Methoxy
Physicochemical Analysis
C267H432N72O81S14
QGKFPWV
A
6395.64
4.70
4
5
32
-2
2.01
0.351
46.30
Mammalian: Yeast: E.coli:
6335
99.05
20
Residue Composition
number
11
A
3
R
4
N
2
D
7
C
3
E
0
Q
0
G
1
H
9
I
1
L
0
K
7
M
0
F
0
P
1
S
4
T
0
W
4
Y
0
V
Amino Acid Distribution
A: 11 R: 3 N: 4 D: 2 C: 7 E: 3 Q: 0 G: 0 H: 1 I: 9 L: 1 K: 0 M: 7 F: 0 P: 0 S: 1 T: 4 W: 0 Y: 4 V: 0
Chemical Descriptors
7
C267H432N72O81S14
6395.64
4.70
-2
2.01
0.351
Self-Assembly Information 4 records
Record 1 Selfassembly

Source

25574757
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Nanotubes
temperature: Room temperature solvent: Methanol concentration: 1 - 10mM
Selfassembly; Nanostructure=Nanotube; Nanotubes; Trigger=temperature: Room temperature; solvent: Methanol; concentration: 1 - 10mM
FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM)
Selfassembly
Record 2 Selfassembly

Source

25574757
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber Nanofibrils
temperature: Room temperature solvent: Ethylacetate concentration: 10mM
Selfassembly; Nanostructure=Nanofiber; Nanofibrils; Trigger=temperature: Room temperature; solvent: Ethylacetate; concentration: 10mM
FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM)
Selfassembly
Record 3 Selfassembly

Source

25574757
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotape
temperature: Room temperature solvent: Chloroform - petroleum ether (1:1 v/v) concentration: 10mM
Selfassembly; Nanostructure=Nanotape; Trigger=temperature: Room temperature; solvent: Chloroform - petroleum ether (1:1 v/v); concentration: 10mM
FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM)
Selfassembly
Record 4 Selfassembly

Source

25574757
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanoribbon Ribbon like Structure
temperature: Room temperature solvent: Acetone concentration: 10mM
Selfassembly; Nanostructure=Nanoribbon; Ribbon like Structure; Trigger=temperature: Room temperature; solvent: Acetone; concentration: 10mM
FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM)
Selfassembly
Evidence Records 4 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Nanotubes Trigger=temperature: Room temperature solvent: Methanol concentration: 1 - 10mM
Nanotube Nanotubes

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Boc (or t-butoxycarbonyl) C-terminal: Methoxy Other: m-ABA=m-aminobenzoic acid Aib=α-aminoisobutyric acid
temperature: Room temperature solvent: Methanol concentration: 1 - 10mM
FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM)
25574757
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber Nanofibrils Trigger=temperature: Room temperature solvent: Ethylacetate concentration: 10mM
Nanofiber Nanofibrils

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Boc (or t-butoxycarbonyl) C-terminal: Methoxy Other: m-ABA=m-aminobenzoic acid Aib=α-aminoisobutyric acid
temperature: Room temperature solvent: Ethylacetate concentration: 10mM
FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM)
25574757
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 3 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotape Trigger=temperature: Room temperature solvent: Chloroform - petroleum ether (1:1 v/v) concentration: 10mM
Nanotape

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Boc (or t-butoxycarbonyl) C-terminal: Methoxy Other: m-ABA=m-aminobenzoic acid Aib=α-aminoisobutyric acid
temperature: Room temperature solvent: Chloroform - petroleum ether (1:1 v/v) concentration: 10mM
FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM)
25574757
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 4 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanoribbon Ribbon like Structure Trigger=temperature: Room temperature solvent: Acetone concentration: 10mM
Nanoribbon Ribbon like Structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Boc (or t-butoxycarbonyl) C-terminal: Methoxy Other: m-ABA=m-aminobenzoic acid Aib=α-aminoisobutyric acid
temperature: Room temperature solvent: Acetone concentration: 10mM
FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM)
25574757
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
temperature: Room temperature solvent: Methanol concentration: 1 - 10mM solvent: Ethylacetate concentration: 10mM solvent: Chloroform - petroleum ether (1:1 v/v) solvent: Acetone
N-terminal: Boc (or t-butoxycarbonyl) C-terminal: Methoxy Other: m-ABA=m-aminobenzoic acid Aib=α-aminoisobutyric acid
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
25574757
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly