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Peptide record

TPDB87532

Ferrocene-FF Selfassembly modified_plain modified
2 amino acids
Basic Information
TPDB87532
Ferrocene-FF
Selfassembly
Self-assembling and biomaterial peptides
SAPdb Peptipedia
modified_plain
Yes
A 2-aa modified selfassembly peptide sequence curated from SAPdb and Peptipedia, without an available 3D structural model.
Modified, details unspecified
Sequence
Ferrocene (FC)-FF
Physicochemical Analysis
C73H99N19O20S2
ADQGHILKMPSTWYV
F
1626.82
4.55
2
3
4
-1
3.10
-0.400
0.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
125
7.68
3
Residue Composition
number
0
A
2
R
1
N
0
D
2
C
3
E
0
Q
0
G
0
H
0
I
0
L
0
K
0
M
4
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 2 N: 1 D: 0 C: 2 E: 3 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 4 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
2
C73H99N19O20S2
1626.82
4.55
-1
3.10
-0.400
Self-Assembly Information 13 records
Record 1 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Rectangular Nanotube
pH: < 5 temperature: 20 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Selfassembly; Nanostructure=Nanotube; Rectangular Nanotube; Trigger=pH: < 5; temperature: 20 °C; solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v); concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 2 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber
pH: 5.6 temperature: 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 20mM
Selfassembly; Nanostructure=Nanofiber; Trigger=pH: 5.6; temperature: 37 °C; solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v); concentration: 20mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 3 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanohelicals Nanohelicals (right handed)
pH: 5.6 temperature: 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% Water (v/ v) + (R)-(-)-2-methylpiperazine concentration: 4mM
Selfassembly; Nanostructure=Nanohelicals; Nanohelicals (right handed); Trigger=pH: 5.6; temperature: 37 °C; solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% Water (v/ v) + (R)-(-)-2-methylpiperazine; concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 4 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanohelicals Nanofibers (right handed)
pH: 5.6 temperature: 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% Water (v/ v) + (S)-(+)-2-methylpiperazine concentration: 4mM
Selfassembly; Nanostructure=Nanohelicals; Nanofibers (right handed); Trigger=pH: 5.6; temperature: 37 °C; solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% Water (v/ v) + (S)-(+)-2-methylpiperazine; concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 5 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanohelicals Highly twisted chiral Nanostructures (big twists)
pH: 5.3 - 5.6 temperature: 37 °C solvent: 10% HFIP + 90% piperazine buffer solution (20 mM, pH 5.6) concentration: 4mM
Selfassembly; Nanostructure=Nanohelicals; Highly twisted chiral Nanostructures (big twists); Trigger=pH: 5.3 - 5.6; temperature: 37 °C; solvent: 10% HFIP + 90% piperazine buffer solution (20 mM, pH 5.6); concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 6 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanohelicals Heterogenous chiral Nanostructures (Nanohelix)
pH: > 6 temperature: 37 °C solvent: 10% HFIP + 90% piperazine buffer solution (20 mM, pH 5.6) concentration: 4mM
Selfassembly; Nanostructure=Nanohelicals; Heterogenous chiral Nanostructures (Nanohelix); Trigger=pH: > 6; temperature: 37 °C; solvent: 10% HFIP + 90% piperazine buffer solution (20 mM, pH 5.6); concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 7 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanohelicals Right Handed Chiral Nanostructure
pH: 5.6 temperature: 37 °C solvent: Ethylenediamine + 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Selfassembly; Nanostructure=Nanohelicals; Right Handed Chiral Nanostructure; Trigger=pH: 5.6; temperature: 37 °C; solvent: Ethylenediamine + 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v); concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 8 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanoribbon Big twist
pH: 5.6 temperature: > 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Selfassembly; Nanostructure=Nanoribbon; Big twist; Trigger=pH: 5.6; temperature: > 37 °C; solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v); concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 9 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanoribbon Nanoribbon(twist)
pH: 5.6 temperature: 37 °C solvent: 10% 2-propanol/ 90% H2O concentration: 4mM
Selfassembly; Nanostructure=Nanoribbon; Nanoribbon(twist); Trigger=pH: 5.6; temperature: 37 °C; solvent: 10% 2-propanol/ 90% H2O; concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 10 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
pH: 5.6 temperature: 37 °C solvent: 10% 2-propanol and 90% PBS solution (100 mM) concentration: 4 mM
Selfassembly; Nanostructure=Nanotube; Trigger=pH: 5.6; temperature: 37 °C; solvent: 10% 2-propanol and 90% PBS solution (100 mM); concentration: 4 mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 11 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Rectangular microtube
pH: 5.6 temperature: 37 °C solvent: Na+ and K+ concentration: 4mM
Selfassembly; Nanostructure=Rectangular microtube; Trigger=pH: 5.6; temperature: 37 °C; solvent: Na+ and K+; concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 12 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Thick microbelt
pH: 5.6 temperature: < 30 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Selfassembly; Nanostructure=Thick microbelt; Trigger=pH: 5.6; temperature: < 30 °C; solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v); concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Record 13 Selfassembly

Source

26018930
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanoscrew
pH: 5.6 temperature: 50 °C solvent: 10% acetonitrile and 90% H2O (20 mM piperazine) concentration: 4 mM
Selfassembly; Nanostructure=Nanoscrew; Trigger=pH: 5.6; temperature: 50 °C; solvent: 10% acetonitrile and 90% H2O (20 mM piperazine); concentration: 4 mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
Selfassembly
Evidence Records 13 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Rectangular Nanotube Trigger=pH: < 5 temperature: 20 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Nanotube Rectangular Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: < 5 temperature: 20 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber Trigger=pH: 5.6 temperature: 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 20mM
Nanofiber

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: 5.6 temperature: 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 20mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 3 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanohelicals Nanohelicals (right handed) Trigger=pH: 5.6 temperature: 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% Water (v/ v) + (R)-(-)-2-methylpiperazine concentration: 4mM
Nanohelicals Nanohelicals (right handed)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: 5.6 temperature: 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% Water (v/ v) + (R)-(-)-2-methylpiperazine concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 4 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanohelicals Nanofibers (right handed) Trigger=pH: 5.6 temperature: 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% Water (v/ v) + (S)-(+)-2-methylpiperazine concentration: 4mM
Nanohelicals Nanofibers (right handed)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: 5.6 temperature: 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% Water (v/ v) + (S)-(+)-2-methylpiperazine concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 5 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanohelicals Highly twisted chiral Nanostructures (big twists) Trigger=pH: 5.3 - 5.6 temperature: 37 °C solvent: 10% HFIP + 90% piperazine buffer solution (20 mM, pH 5.6) concentration: 4mM
Nanohelicals Highly twisted chiral Nanostructures (big twists)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: 5.3 - 5.6 temperature: 37 °C solvent: 10% HFIP + 90% piperazine buffer solution (20 mM, pH 5.6) concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 6 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanohelicals Heterogenous chiral Nanostructures (Nanohelix) Trigger=pH: > 6 temperature: 37 °C solvent: 10% HFIP + 90% piperazine buffer solution (20 mM, pH 5.6) concentration: 4mM
Nanohelicals Heterogenous chiral Nanostructures (Nanohelix)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: > 6 temperature: 37 °C solvent: 10% HFIP + 90% piperazine buffer solution (20 mM, pH 5.6) concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 7 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanohelicals Right Handed Chiral Nanostructure Trigger=pH: 5.6 temperature: 37 °C solvent: Ethylenediamine + 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Nanohelicals Right Handed Chiral Nanostructure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: 5.6 temperature: 37 °C solvent: Ethylenediamine + 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 8 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanoribbon Big twist Trigger=pH: 5.6 temperature: > 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Nanoribbon Big twist

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: 5.6 temperature: > 37 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 9 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanoribbon Nanoribbon(twist) Trigger=pH: 5.6 temperature: 37 °C solvent: 10% 2-propanol/ 90% H2O concentration: 4mM
Nanoribbon Nanoribbon(twist)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: 5.6 temperature: 37 °C solvent: 10% 2-propanol/ 90% H2O concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 10 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=pH: 5.6 temperature: 37 °C solvent: 10% 2-propanol and 90% PBS solution (100 mM) concentration: 4 mM
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: 5.6 temperature: 37 °C solvent: 10% 2-propanol and 90% PBS solution (100 mM) concentration: 4 mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 11 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Rectangular microtube Trigger=pH: 5.6 temperature: 37 °C solvent: Na+ and K+ concentration: 4mM
Rectangular microtube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: 5.6 temperature: 37 °C solvent: Na+ and K+ concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1205 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 12 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Thick microbelt Trigger=pH: 5.6 temperature: < 30 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Thick microbelt

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: 5.6 temperature: < 30 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1206 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 13 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanoscrew Trigger=pH: 5.6 temperature: 50 °C solvent: 10% acetonitrile and 90% H2O (20 mM piperazine) concentration: 4 mM
Nanoscrew

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Ferrocene (FC)
pH: 5.6 temperature: 50 °C solvent: 10% acetonitrile and 90% H2O (20 mM piperazine) concentration: 4 mM
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM)
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1210 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Additional Detail Fields 5 fields
pH: < 5 temperature: 20 °C solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) concentration: 4mM pH: 5.6 temperature: 37 °C concentration: 20mM solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% Water (v/ v) + (R)-(-)-2-methylpiperazine solvent: 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% Water (v/ v) + (S)-(+)-2-methylpiperazine pH: 5.3 - 5.6 solvent: 10% HFIP + 90% piperazine buffer solution (20 mM, pH 5.6) pH: > 6 solvent: Ethylenediamine + 10% HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) and 90% H2O (v/ v) temperature: > 37 °C solvent: 10% 2-propanol/ 90% H2O solvent: 10% 2-propanol and 90% PBS solution (100 mM) concentration: 4 mM solvent: Na+ and K+ temperature: < 30 °C temperature: 50 °C solvent: 10% acetonitrile and 90% H2O (20 mM piperazine)
N-terminal: Ferrocene (FC)
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database. SAPdb ID 1205 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row. SAPdb ID 1206 SAPdb ID 1210
26018930
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly