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Peptide record

TPDB87527

12-G(NH2)LG(NH2)-12 Selfassembly modified_plain modified
3 amino acids
Basic Information
TPDB87527
12-G(NH2)LG(NH2)-12
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
modified_plain
Yes
A 3-aa modified selfassembly peptide sequence curated from SAPdb, without an available 3D structural model.
Modified, details unspecified
Sequence
Dodecylation-EKE-Dodecylation
Physicochemical Analysis
C112H170N26O46S2
RQGHMFPSWV
DE
2680.85
3.23
1
8
8
-7
10.67
-0.610
60.69
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
3105
115.82
8
Residue Composition
number
2
A
0
R
2
N
4
D
2
C
4
E
0
Q
0
G
0
H
2
I
2
L
1
K
0
M
0
F
0
P
0
S
2
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 2 R: 0 N: 2 D: 4 C: 2 E: 4 Q: 0 G: 0 H: 0 I: 2 L: 2 K: 1 M: 0 F: 0 P: 0 S: 0 T: 2 W: 0 Y: 2 V: 0
Chemical Descriptors
3
C112H170N26O46S2
2680.85
3.23
-7
10.67
-0.610
Self-Assembly Information 3 records
Record 1 Selfassembly

Source

25588349
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber Twisted fibers
pH: 3 temperature: Room temperature solvent: Water concentration: 0.04 - 0.20 mM
Selfassembly; Nanostructure=Nanofiber; Twisted fibers; Trigger=pH: 3; temperature: Room temperature; solvent: Water; concentration: 0.04 - 0.20 mM
Scanning Electron Microscopy (SEM), Cryo - Transmission Electron Microscopy (TEM)
Selfassembly
Record 2 Selfassembly

Source

25588349
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanoribbon Twisted ribbons
pH: 11 temperature: Room temperature solvent: Water concentration: 0.20 - 1.0 mM
Selfassembly; Nanostructure=Nanoribbon; Twisted ribbons; Trigger=pH: 11; temperature: Room temperature; solvent: Water; concentration: 0.20 - 1.0 mM
Scanning Electron Microscopy (SEM), Cryo - Transmission Electron Microscopy (TEM)
Selfassembly
Record 3 Selfassembly

Source

25588349
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Fibers (untwisted) like precipitates
pH: 7 temperature: Room temperature solvent: Water concentration: 0.20 mM
Selfassembly; Nanostructure=Fibers (untwisted) like precipitates; Trigger=pH: 7; temperature: Room temperature; solvent: Water; concentration: 0.20 mM
Scanning Electron Microscopy (SEM), Cryo - Transmission Electron Microscopy (TEM)
Selfassembly
Evidence Records 3 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber Twisted fibers Trigger=pH: 3 temperature: Room temperature solvent: Water concentration: 0.04 - 0.20 mM
Nanofiber Twisted fibers

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Dodecylation C-terminal: Dodecylation
pH: 3 temperature: Room temperature solvent: Water concentration: 0.04 - 0.20 mM
Scanning Electron Microscopy (SEM), Cryo - Transmission Electron Microscopy (TEM)
25588349
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanoribbon Twisted ribbons Trigger=pH: 11 temperature: Room temperature solvent: Water concentration: 0.20 - 1.0 mM
Nanoribbon Twisted ribbons

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Dodecylation C-terminal: Dodecylation
pH: 11 temperature: Room temperature solvent: Water concentration: 0.20 - 1.0 mM
Scanning Electron Microscopy (SEM), Cryo - Transmission Electron Microscopy (TEM)
25588349
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 3 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Fibers (untwisted) like precipitates Trigger=pH: 7 temperature: Room temperature solvent: Water concentration: 0.20 mM
Fibers (untwisted) like precipitates

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Dodecylation C-terminal: Dodecylation
pH: 7 temperature: Room temperature solvent: Water concentration: 0.20 mM
Scanning Electron Microscopy (SEM), Cryo - Transmission Electron Microscopy (TEM)
25588349
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1188 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Additional Detail Fields 5 fields
pH: 3 temperature: Room temperature solvent: Water concentration: 0.04 - 0.20 mM pH: 11 concentration: 0.20 - 1.0 mM pH: 7 concentration: 0.20 mM
N-terminal: Dodecylation C-terminal: Dodecylation
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database. SAPdb ID 1188 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
25588349
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly