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Peptide record

TPDB87499

1 or Boc-{(N-Cbz)-Lys}-Phe-Ala Selfassembly modified_plain modified
3 amino acids
Basic Information
TPDB87499
1 or Boc-{(N-Cbz)-Lys}-Phe-Ala
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
modified_plain
Yes
A 3-aa modified selfassembly peptide sequence curated from SAPdb, without an available 3D structural model.
Modified, details unspecified
Sequence
N-Cbz lysine (Cbz = benzyloxy-carbonyl) and Boc (N-t-Butoxycarbonyl)-KFA
Physicochemical Analysis
C191H281N51O60S5
QGHMPWV
N
4411.94
6.12
3
3
16
-0
0.03
-0.218
32.64
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
9190
208.30
21
Residue Composition
number
4
A
2
R
7
N
1
D
5
C
2
E
0
Q
0
G
0
H
1
I
4
L
1
K
0
M
1
F
0
P
1
S
2
T
0
W
6
Y
0
V
Amino Acid Distribution
A: 4 R: 2 N: 7 D: 1 C: 5 E: 2 Q: 0 G: 0 H: 0 I: 1 L: 4 K: 1 M: 0 F: 1 P: 0 S: 1 T: 2 W: 0 Y: 6 V: 0
Chemical Descriptors
3
C191H281N51O60S5
4411.94
6.12
-0
0.03
-0.218
Self-Assembly Information 2 records
Record 1 Selfassembly

Source

21472901
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanovesicle vesicle structure
temperature: Room temperature solvent: THF (Tetrahydrofuran):Water (1:1) concentration: 2mg/ml
Selfassembly; Nanostructure=Nanovesicle; vesicle structure; Trigger=temperature: Room temperature; solvent: THF (Tetrahydrofuran):Water (1:1); concentration: 2mg/ml
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM) NMR and Mass spectrometery
Selfassembly
Record 2 Selfassembly

Source

21472901
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber Nanofibril structure
temperature: Room temperature solvent: THF (Tetrahydrofuran):Water (1:1) concentration: 2mg/ml
Selfassembly; Nanostructure=Nanofiber; Nanofibril structure; Trigger=temperature: Room temperature; solvent: THF (Tetrahydrofuran):Water (1:1); concentration: 2mg/ml
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM) NMR and Mass spectrometery
Selfassembly
Evidence Records 2 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanovesicle vesicle structure Trigger=temperature: Room temperature solvent: THF (Tetrahydrofuran):Water (1:1) concentration: 2mg/ml
Nanovesicle vesicle structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: N-Cbz lysine (Cbz = benzyloxy-carbonyl) and Boc (N-t-Butoxycarbonyl)
temperature: Room temperature solvent: THF (Tetrahydrofuran):Water (1:1) concentration: 2mg/ml
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM) NMR and Mass spectrometery
21472901
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber Nanofibril structure Trigger=temperature: Room temperature solvent: THF (Tetrahydrofuran):Water (1:1) concentration: 2mg/ml
Nanofiber Nanofibril structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: N-Cbz lysine (Cbz = benzyloxy-carbonyl) and Boc (N-t-Butoxycarbonyl)
temperature: Room temperature solvent: THF (Tetrahydrofuran):Water (1:1) concentration: 2mg/ml
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM) NMR and Mass spectrometery
21472901
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
temperature: Room temperature solvent: THF (Tetrahydrofuran):Water (1:1) concentration: 2mg/ml
N-terminal: N-Cbz lysine (Cbz = benzyloxy-carbonyl) and Boc (N-t-Butoxycarbonyl)
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
21472901
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly