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Peptide record

TPDB87498

Ac-VYK Selfassembly modified_plain modified
3 amino acids
Basic Information
TPDB87498
Ac-VYK
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
modified_plain
Yes
A 3-aa modified selfassembly peptide sequence curated from SAPdb, without an available 3D structural model.
Modified, details unspecified
Sequence
Acetylation-VYK
Physicochemical Analysis
C67H105N15O21S1
RDQGHMFPSW
ATY
1488.72
6.27
1
1
7
-0
0.45
0.247
84.67
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
2980
200.17
6
Residue Composition
number
2
A
0
R
1
N
0
D
1
C
1
E
0
Q
0
G
0
H
1
I
1
L
1
K
0
M
0
F
0
P
0
S
2
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 2 R: 0 N: 1 D: 0 C: 1 E: 1 Q: 0 G: 0 H: 0 I: 1 L: 1 K: 1 M: 0 F: 0 P: 0 S: 0 T: 2 W: 0 Y: 2 V: 1
Chemical Descriptors
3
C67H105N15O21S1
1488.72
6.27
-0
0.45
0.247
Self-Assembly Information 1 records
Record 1 Selfassembly

Source

16339876
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Tubular structure
pH: 7.2 temperature: Approximately at 21°C solvent: 5 mM or 20 mM 3-[N-morpholino]- propanesulfonic acid (MOPS) buffer, concentration: 0.1-1mg/ml
Selfassembly; Nanostructure=Nanotube; Tubular structure; Trigger=pH: 7.2; temperature: Approximately at 21°C; solvent: 5 mM or 20 mM 3-[N-morpholino]- propanesulfonic acid (MOPS) buffer,; concentration: 0.1-1mg/ml
Transmission Electron Microscopy (TEM)
Selfassembly
Evidence Records 1 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Tubular structure Trigger=pH: 7.2 temperature: Approximately at 21°C solvent: 5 mM or 20 mM 3-[N-morpholino]- propanesulfonic acid (MOPS) buffer, concentration: 0.1-1mg/ml
Nanotube Tubular structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: Acetylation
pH: 7.2 temperature: Approximately at 21°C solvent: 5 mM or 20 mM 3-[N-morpholino]- propanesulfonic acid (MOPS) buffer, concentration: 0.1-1mg/ml
Transmission Electron Microscopy (TEM)
16339876
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 7.2 temperature: Approximately at 21°C solvent: 5 mM or 20 mM 3-[N-morpholino]- propanesulfonic acid (MOPS) buffer, concentration: 0.1-1mg/ml
N-terminal: Acetylation
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
16339876
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly