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Peptide record

TPDB87492

D- Phenylalanine-L-Phenylalanine-L-isoleucine Selfassembly standard
2 amino acids
Basic Information
3D PDB MODEL
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TPDB87492
D- Phenylalanine-L-Phenylalanine-L-isoleucine
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
standard
No
A 2-aa standard natural selfassembly peptide sequence curated from SAPdb, with an available 3D structural model.
Sequence
fDI
Physicochemical Analysis
C19H27N3O6
ARNCEQGHLKMPSTWYV
DIF
393.44
3.10
0
1
2
-1
-0.21
1.267
130.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
0
A
0
R
0
N
1
D
0
C
0
E
0
Q
0
G
0
H
1
I
0
L
0
K
0
M
1
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 1 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 0 K: 0 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
2
C19H27N3O6
393.44
3.10
-1
-0.21
1.267
Self-Assembly Information 2 records
Record 1 Selfassembly

Source

25891849
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber Highly ordered fibres
pH: 8 temperature: Room temperature solvent: Phosphate buffer (30mM,) concentration: 12.5mg/ml
Selfassembly; Nanostructure=Nanofiber; Highly ordered fibres; Trigger=pH: 8; temperature: Room temperature; solvent: Phosphate buffer (30mM,); concentration: 12.5mg/ml
Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM) and CD (Circular Dichroism spectroscopy)
Selfassembly
Record 2 Selfassembly

Source

25891849
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Hydrogel consists of highly ordred fibers
pH: 8 temperature: Room temperature solvent: Phosphate buffer (30mM,) concentration: 12.5mg/ml
Selfassembly; Nanostructure=Hydrogel; Hydrogel consists of highly ordred fibers; Trigger=pH: 8; temperature: Room temperature; solvent: Phosphate buffer (30mM,); concentration: 12.5mg/ml
Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM) and CD (Circular Dichroism spectroscopy)
Selfassembly
Evidence Records 2 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber Highly ordered fibres Trigger=pH: 8 temperature: Room temperature solvent: Phosphate buffer (30mM,) concentration: 12.5mg/ml
Nanofiber Highly ordered fibres

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 8 temperature: Room temperature solvent: Phosphate buffer (30mM,) concentration: 12.5mg/ml
Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM) and CD (Circular Dichroism spectroscopy)
25891849
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Hydrogel consists of highly ordred fibers Trigger=pH: 8 temperature: Room temperature solvent: Phosphate buffer (30mM,) concentration: 12.5mg/ml
Hydrogel Hydrogel consists of highly ordred fibers

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 8 temperature: Room temperature solvent: Phosphate buffer (30mM,) concentration: 12.5mg/ml
Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM) and CD (Circular Dichroism spectroscopy)
25891849
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 8 temperature: Room temperature solvent: Phosphate buffer (30mM,) concentration: 12.5mg/ml
None specified
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
25891849
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly