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Peptide record

TPDB87491

D-Phenylalanine-L-Phenylalanine-L-aspartic acid Selfassembly standard
2 amino acids
Basic Information
3D PDB MODEL
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TPDB87491
D-Phenylalanine-L-Phenylalanine-L-aspartic acid
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
standard
No
A 2-aa standard natural selfassembly peptide sequence curated from SAPdb, with an available 3D structural model.
Sequence
fFD
Physicochemical Analysis
C22H25N3O6
ARNCEQGHILKMPSTWYV
F
427.46
3.10
0
1
2
-1
-1.03
0.700
0.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
0
A
0
R
0
N
1
D
0
C
0
E
0
Q
0
G
0
H
0
I
0
L
0
K
0
M
2
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 1 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 2 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
2
C22H25N3O6
427.46
3.10
-1
-1.03
0.700
Self-Assembly Information 2 records
Record 1 Selfassembly

Source

25891849
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Organogel
temperature: Room temperature solvent: Methanol (25 mM) concentration: 10mg/ml
Selfassembly; Nanostructure=Organogel; Trigger=temperature: Room temperature; solvent: Methanol (25 mM); concentration: 10mg/ml
Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM)
Selfassembly
Record 2 Selfassembly

Source

25891849
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Disorder Short fibres
temperature: Room temperature solvent: Methanol (25 mM) concentration: 10mg/ml
Selfassembly; Nanostructure=Disorder Short fibres; Trigger=temperature: Room temperature; solvent: Methanol (25 mM); concentration: 10mg/ml
Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM)
Selfassembly
Evidence Records 2 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Organogel Trigger=temperature: Room temperature solvent: Methanol (25 mM) concentration: 10mg/ml
Organogel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: Methanol (25 mM) concentration: 10mg/ml
Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM)
25891849
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Disorder Short fibres Trigger=temperature: Room temperature solvent: Methanol (25 mM) concentration: 10mg/ml
Disorder Short fibres

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: Methanol (25 mM) concentration: 10mg/ml
Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM)
25891849
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1102 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Additional Detail Fields 5 fields
temperature: Room temperature solvent: Methanol (25 mM) concentration: 10mg/ml
None specified
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database. SAPdb ID 1102 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
25891849
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly