Back to search

Peptide record

TPDB87485

Peptide-1 Peptide1-Ad Selfassembly modified_plain modified
3 amino acids
Basic Information
TPDB87485
Peptide-1 Peptide1-Ad
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
modified_plain
Yes
A 3-aa modified selfassembly peptide sequence curated from SAPdb, without an available 3D structural model.
Modified, details unspecified
Sequence
N-(fluorenyl-9-methoxycarbonyl) or fmoc and acetamidomethyl-CHC
Physicochemical Analysis
C223H332N62O67S9
QGKPSWV
C
5242.00
5.24
6
6
19
-3
6.58
-0.203
37.30
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
6210
118.47
16
Residue Composition
number
4
A
3
R
4
N
2
D
5
C
4
E
0
Q
0
G
3
H
1
I
4
L
0
K
4
M
2
F
0
P
0
S
3
T
0
W
4
Y
0
V
Amino Acid Distribution
A: 4 R: 3 N: 4 D: 2 C: 5 E: 4 Q: 0 G: 0 H: 3 I: 1 L: 4 K: 0 M: 4 F: 2 P: 0 S: 0 T: 3 W: 0 Y: 4 V: 0
Chemical Descriptors
3
C223H332N62O67S9
5242.00
5.24
-3
6.58
-0.203
Self-Assembly Information 2 records
Record 1 Selfassembly

Source

25379633
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Hydrogel (supramolecular bilayer architectures)
pH: 6 - 8 temperature: Room temperature solvent: water concentration: > 1.5wt%
Selfassembly; Nanostructure=Hydrogel; Hydrogel (supramolecular bilayer architectures); Trigger=pH: 6 - 8; temperature: Room temperature; solvent: water; concentration: > 1.5wt%
AFM (Atomic Force Microscopy), SAXS small angle X - ray scattering
Selfassembly
Record 2 Selfassembly

Source

25379633
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanorod Rod like structures
pH: 4 and 6 temperature: Room temperature solvent: water concentration: > 1.0wt%
Selfassembly; Nanostructure=Nanorod; Rod like structures; Trigger=pH: 4 and 6; temperature: Room temperature; solvent: water; concentration: > 1.0wt%
AFM (Atomic Force Microscopy), SAXS small angle X - ray scattering
Selfassembly
Evidence Records 2 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Hydrogel (supramolecular bilayer architectures) Trigger=pH: 6 - 8 temperature: Room temperature solvent: water concentration: > 1.5wt%
Hydrogel Hydrogel (supramolecular bilayer architectures)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: N-(fluorenyl-9-methoxycarbonyl) or fmoc and acetamidomethyl
pH: 6 - 8 temperature: Room temperature solvent: water concentration: > 1.5wt%
AFM (Atomic Force Microscopy), SAXS small angle X - ray scattering
25379633
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanorod Rod like structures Trigger=pH: 4 and 6 temperature: Room temperature solvent: water concentration: > 1.0wt%
Nanorod Rod like structures

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

N-terminal: N-(fluorenyl-9-methoxycarbonyl) or fmoc and acetamidomethyl
pH: 4 and 6 temperature: Room temperature solvent: water concentration: > 1.0wt%
AFM (Atomic Force Microscopy), SAXS small angle X - ray scattering
25379633
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
pH: 6 - 8 temperature: Room temperature solvent: water concentration: > 1.5wt% pH: 4 and 6 concentration: > 1.0wt%
N-terminal: N-(fluorenyl-9-methoxycarbonyl) or fmoc and acetamidomethyl
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
25379633
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly