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Peptide record

TPDB87478

(L-Lys)-(L-Phe)-(L-Ala) Selfassembly standard
3 amino acids
Basic Information
3D PDB MODEL
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TPDB87478
(L-Lys)-(L-Phe)-(L-Ala)
Selfassembly
Self-assembling and biomaterial peptides
SAPdb
standard
No
A 3-aa standard natural selfassembly peptide sequence curated from SAPdb, with an available 3D structural model.
Sequence
KFA
Physicochemical Analysis
C18H28N4O4
RNDCEQGHILMPSTWYV
AKF
364.44
10.10
1
0
2
+1
-0.31
0.233
33.33
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
0
L
1
K
0
M
1
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 1 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
3
C18H28N4O4
364.44
10.10
+1
-0.31
0.233
Self-Assembly Information 3 records
Record 1 Selfassembly

Source

23598886
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanohelicals Left handed Nanohelicals structure
temperature: 3-5 °C solvent: THF(< 10uM) concentration: > 1.0x 10-5 M
Selfassembly; Nanostructure=Nanohelicals; Left handed Nanohelicals structure; Trigger=temperature: 3-5 °C; solvent: THF(< 10uM); concentration: > 1.0x 10-5 M
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM), FTIR (Fourier Transform Infrared) Spectroscopy (Fourier Transform Infrared) Spectroscopy and CD (Circular Dichroism spectroscopy)
Selfassembly
Record 2 Selfassembly

Source

23598886
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanohelicals Right handed Nanohelicals structure
temperature: 3-5 °C solvent: THF(< 10uM) concentration: > 1.0x 10-5 M
Selfassembly; Nanostructure=Nanohelicals; Right handed Nanohelicals structure; Trigger=temperature: 3-5 °C; solvent: THF(< 10uM); concentration: > 1.0x 10-5 M
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM), FTIR (Fourier Transform Infrared) Spectroscopy (Fourier Transform Infrared) Spectroscopy and CD (Circular Dichroism spectroscopy)
Selfassembly
Record 3 Selfassembly

Source

23598886
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanoparticle
temperature: 3-5 °C solvent: THF(< 10uM) concentration: > 2.0x 10-5 M
Selfassembly; Nanostructure=Nanoparticle; Trigger=temperature: 3-5 °C; solvent: THF(< 10uM); concentration: > 2.0x 10-5 M
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM), FTIR (Fourier Transform Infrared) Spectroscopy (Fourier Transform Infrared) Spectroscopy and CD (Circular Dichroism spectroscopy)
Selfassembly
Evidence Records 3 records
Evidence 1 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanohelicals Left handed Nanohelicals structure Trigger=temperature: 3-5 °C solvent: THF(< 10uM) concentration: > 1.0x 10-5 M
Nanohelicals Left handed Nanohelicals structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 3-5 °C solvent: THF(< 10uM) concentration: > 1.0x 10-5 M
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM), FTIR (Fourier Transform Infrared) Spectroscopy (Fourier Transform Infrared) Spectroscopy and CD (Circular Dichroism spectroscopy)
23598886
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 2 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanohelicals Right handed Nanohelicals structure Trigger=temperature: 3-5 °C solvent: THF(< 10uM) concentration: > 1.0x 10-5 M
Nanohelicals Right handed Nanohelicals structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 3-5 °C solvent: THF(< 10uM) concentration: > 1.0x 10-5 M
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM), FTIR (Fourier Transform Infrared) Spectroscopy (Fourier Transform Infrared) Spectroscopy and CD (Circular Dichroism spectroscopy)
23598886
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 3 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanoparticle Trigger=temperature: 3-5 °C solvent: THF(< 10uM) concentration: > 2.0x 10-5 M
Nanoparticle

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 3-5 °C solvent: THF(< 10uM) concentration: > 2.0x 10-5 M
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM), FTIR (Fourier Transform Infrared) Spectroscopy (Fourier Transform Infrared) Spectroscopy and CD (Circular Dichroism spectroscopy)
23598886
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Additional Detail Fields 5 fields
temperature: 3-5 °C solvent: THF(< 10uM) concentration: > 1.0x 10-5 M concentration: > 2.0x 10-5 M
None specified
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
23598886
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly