TPDB

3D PDB MODEL

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TPDB ID TPDB65546

Activity

Tumor T cell antigens

Activity_category_statistics

Cancer-related peptides

Database_Source

ENCAP iTTCA-Hybrid iTTCA-RF LYnet-master

Sequence_Type

standard

Has_Modification No

Description A 10-aa standard natural tumor t cell antigens peptide sequence curated from ENCAP, iTTCA-Hybrid, iTTCA-RF, and other sources, with an available 3D structural model.

Sequence

YLWWVNNQSL

FASTA

>TPDB65546|Tumor T cell antigens|length=10
YLWWVNNQSL

Formula C64H87N15O16

Absent Amino Acids ARDCEGHIKMFPT

Common Amino Acids NLW

Mass 1322.49

PI 5.94

Basic Residues 0

Acidic Residues 0

Hydrophobic Residues 6

Net Charge -0

Boman Index -4.14

Hydrophobicity -0.260

Aliphatic Index 107.00

Half Life

Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min

Extinction Coefficient Cystines 12490

Absorbance 280nm 944.43

Polar Residues 5

number

0

A

0

R

2

N

0

D

0

C

0

E

1

Q

0

G

0

H

0

I

2

L

0

K

0

M

0

F

0

P

1

S

0

T

2

W

1

Y

1

V

Amino Acid Distribution

A: 0 R: 0 N: 2 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 0 I: 0 L: 2 K: 0 M: 0 F: 0 P: 0 S: 1 T: 0 W: 2 Y: 1 V: 1

Length

10

Formula

C64H87N15O16

Mass

1322.49

PI

5.94

Net Charge

-0

Boman Index

-4.14

Hydrophobicity

-0.260

Evidence 1 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0201

Epitope Type Overexpressed antigen

Genomic Origin Overexpressed antigen

Evidence 2 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0202

Epitope Type Overexpressed antigen

Genomic Origin Overexpressed antigen

Evidence 3 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0203

Epitope Type Overexpressed antigen

Genomic Origin Overexpressed antigen

Evidence 4 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0206

Epitope Type Overexpressed antigen

Genomic Origin Overexpressed antigen

Evidence 5 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*6802

Epitope Type Overexpressed antigen

Genomic Origin Overexpressed antigen

Epitope_Type

Overexpressed antigen

Genomic_Origin

Overexpressed antigen

HLA_Allele

A*0201 A*0202 A*0203 A*0206 A*6802