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Peptide record

TPDB65516

Tumor T cell antigens standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB65516
Tumor T cell antigens
Cancer-related peptides
ENCAP iTTCA-Hybrid iTTCA-RF LYnet-master
standard
No
A 9-aa standard-residue tumor t cell antigens peptide sequence curated from ENCAP, iTTCA-Hybrid, iTTCA-RF, and other sources, with an available 3D structural model.
Sequence
NYKRCFPVI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C53H82N14O12S1
ADEQGHLMSTW
RNCIKFPYV
1139.38
9.77
2
0
4
+2
1.56
-0.089
75.56
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
1490
1.31
3
Residue Composition
number
0
A
1
R
1
N
0
D
1
C
0
E
0
Q
0
G
0
H
1
I
0
L
1
K
0
M
1
F
1
P
0
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 1 D: 0 C: 1 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 0 K: 1 M: 0 F: 1 P: 1 S: 0 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
9 reviewed residue count
C53H82N14O12S1 sequence-only estimate (linear, free termini)
1139.38 sequence-only estimate (linear, free termini)
9.77 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
1.56 sequence-only estimate (linear, free termini)
-0.089 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Activity

Tumor T cell antigens

Assay & Model

in vitro

Source & Reference

NA
TANTIGEN/TADB

Other

T-cell epitope
A*2402
Shared tumor specific antigen
Shared tumor specific antigen
Additional Detail Fields 3 fields
Shared tumor specific antigen
Shared tumor specific antigen
A*2402