TPDB

3D PDB MODEL

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TPDB ID TPDB65429

Activity

Tumor T cell antigens

Activity_category_statistics

Cancer-related peptides

Database_Source

ENCAP iTTCA-Hybrid iTTCA-RF LYnet-master

Sequence_Type

standard

Has_Modification No

Description A 11-aa standard natural tumor t cell antigens peptide sequence curated from ENCAP, iTTCA-Hybrid, iTTCA-RF, and other sources, with an available 3D structural model.

Sequence

QLVFGIELMEV

FASTA

>TPDB65429|Tumor T cell antigens|length=11
QLVFGIELMEV

Formula C59H96N12O17S1

Absent Amino Acids ARNDCHKPSTWY

Common Amino Acids ELV

Mass 1277.54

PI 3.13

Basic Residues 0

Acidic Residues 2

Hydrophobic Residues 7

Net Charge -2

Boman Index 1.98

Hydrophobicity 1.300

Aliphatic Index 159.09

Half Life

Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 1

number

0

A

0

R

0

N

0

D

0

C

2

E

1

Q

1

G

0

H

1

I

2

L

0

K

1

M

1

F

0

P

0

S

0

T

0

W

0

Y

2

V

Amino Acid Distribution

A: 0 R: 0 N: 0 D: 0 C: 0 E: 2 Q: 1 G: 1 H: 0 I: 1 L: 2 K: 0 M: 1 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 2

Length

11

Formula

C59H96N12O17S1

Mass

1277.54

PI

3.13

Net Charge

-2

Boman Index

1.98

Hydrophobicity

1.300

Evidence 1 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A2

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 2 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0201

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 3 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0202

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 4 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0203

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 5 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0206

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 6 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*6802

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Epitope_Type

Shared tumor specific antigen

Genomic_Origin

Shared tumor specific antigen

HLA_Allele

A2 A*0201 A*0202 A*0203 A*0206 A*6802