TPDB

3D PDB MODEL

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TPDB ID TPDB65322

Activity

Tumor T cell antigens

Activity_category_statistics

Cancer-related peptides

Database_Source

ENCAP iTTCA-Hybrid iTTCA-RF LYnet-master

Sequence_Type

standard

Has_Modification No

Description A 11-aa standard natural tumor t cell antigens peptide sequence curated from ENCAP, iTTCA-Hybrid, iTTCA-RF, and other sources, with an available 3D structural model.

Sequence

IMPKAGLLIIV

FASTA

>TPDB65322|Tumor T cell antigens|length=11
IMPKAGLLIIV

Formula C56H102N12O12S1

Absent Amino Acids RNDCEQHFSTWY

Common Amino Acids I

Mass 1167.56

PI 10.10

Basic Residues 1

Acidic Residues 0

Hydrophobic Residues 8

Net Charge +1

Boman Index -0.93

Hydrophobicity 2.100

Aliphatic Index 212.73

Half Life

Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 0

number

1

A

0

R

0

N

0

D

0

C

0

E

0

Q

1

G

0

H

3

I

2

L

1

K

1

M

0

F

1

P

0

S

0

T

0

W

0

Y

1

V

Amino Acid Distribution

A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 3 L: 2 K: 1 M: 1 F: 0 P: 1 S: 0 T: 0 W: 0 Y: 0 V: 1

Length

11

Formula

C56H102N12O12S1

Mass

1167.56

PI

10.10

Net Charge

+1

Boman Index

-0.93

Hydrophobicity

2.100

Evidence 1 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A2

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 2 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0201

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 3 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0202

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 4 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0203

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 5 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0206

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Epitope_Type

Shared tumor specific antigen

Genomic_Origin

Shared tumor specific antigen

HLA_Allele

A2 A*0201 A*0202 A*0203 A*0206