TPDB

3D PDB MODEL

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TPDB ID TPDB65268

Activity

Tumor T cell antigens

Activity_category_statistics

Cancer-related peptides

Database_Source

ENCAP iTTCA-Hybrid iTTCA-RF LYnet-master

Sequence_Type

standard

Has_Modification No

Description A 9-aa standard natural tumor t cell antigens peptide sequence curated from ENCAP, iTTCA-Hybrid, iTTCA-RF, and other sources, with an available 3D structural model.

Sequence

ATVGIMIGV

FASTA

>TPDB65268|Tumor T cell antigens|length=9
ATVGIMIGV

Formula C38H69N9O11S1

Absent Amino Acids RNDCEQHLKFPSWY

Common Amino Acids GIV

Mass 860.08

PI 6.02

Basic Residues 0

Acidic Residues 0

Hydrophobic Residues 6

Net Charge -0

Boman Index -0.72

Hydrophobicity 2.178

Aliphatic Index 162.22

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 1

number

1

A

0

R

0

N

0

D

0

C

0

E

0

Q

2

G

0

H

2

I

0

L

0

K

1

M

0

F

0

P

0

S

1

T

0

W

0

Y

2

V

Amino Acid Distribution

A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 2 L: 0 K: 0 M: 1 F: 0 P: 0 S: 0 T: 1 W: 0 Y: 0 V: 2

Length

9

Formula

C38H69N9O11S1

Mass

860.08

PI

6.02

Net Charge

-0

Boman Index

-0.72

Hydrophobicity

2.178

Evidence 1 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0201

Epitope Type Overexpressed antigen

Genomic Origin Overexpressed antigen

Evidence 2 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0202

Epitope Type Overexpressed antigen

Genomic Origin Overexpressed antigen

Evidence 3 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0203

Epitope Type Overexpressed antigen

Genomic Origin Overexpressed antigen

Evidence 4 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0206

Epitope Type Overexpressed antigen

Genomic Origin Overexpressed antigen

Evidence 5 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*6802

Epitope Type Overexpressed antigen

Genomic Origin Overexpressed antigen

Epitope_Type

Overexpressed antigen

Genomic_Origin

Overexpressed antigen

HLA_Allele

A*0201 A*0202 A*0203 A*0206 A*6802