TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB65257

Activity

Tumor T cell antigens

Activity_category_statistics

Cancer-related peptides

Database_Source

ENCAP iTTCA-Hybrid iTTCA-RF LYnet-master

Sequence_Type

standard

Has_Modification No

Description A 9-aa standard natural tumor t cell antigens peptide sequence curated from ENCAP, iTTCA-Hybrid, iTTCA-RF, and other sources, with an available 3D structural model.

Sequence

FLWGPRALV

FASTA

>TPDB65257|Tumor T cell antigens|length=9
FLWGPRALV

Formula C53H79N13O10

Absent Amino Acids NDCEQHIKMSTY

Common Amino Acids L

Mass 1058.29

PI 11.05

Basic Residues 1

Acidic Residues 0

Hydrophobic Residues 6

Net Charge +1

Boman Index -2.93

Hydrophobicity 1.000

Aliphatic Index 130.00

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 5500

Absorbance 280nm 519.71

Polar Residues 0

number

1

A

1

R

0

N

0

D

0

C

0

E

0

Q

1

G

0

H

0

I

2

L

0

K

0

M

1

F

1

P

0

S

0

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 1 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 0 L: 2 K: 0 M: 0 F: 1 P: 1 S: 0 T: 0 W: 1 Y: 0 V: 1

Length

9

Formula

C53H79N13O10

Mass

1058.29

PI

11.05

Net Charge

+1

Boman Index

-2.93

Hydrophobicity

1.000

Evidence 1 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0201

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 2 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0202

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 3 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0203

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 4 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0206

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 5 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0207

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 6 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0209

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 7 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*6802

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Epitope_Type

Shared tumor specific antigen

Genomic_Origin

Shared tumor specific antigen

HLA_Allele

A*0201 A*0202 A*0203 A*0206 A*0207 A*0209 A*6802