TPDB

3D PDB MODEL

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TPDB ID TPDB65019

Activity

Tumor T cell antigens

Activity_category_statistics

Cancer-related peptides

Database_Source

ENCAP iTTCA-Hybrid iTTCA-RF LYnet-master

Sequence_Type

standard

Has_Modification No

Description A 10-aa standard natural tumor t cell antigens peptide sequence curated from ENCAP, iTTCA-Hybrid, iTTCA-RF, and other sources, with an available 3D structural model.

Sequence

LVFGIEVVEV

FASTA

>TPDB65019|Tumor T cell antigens|length=10
LVFGIEVVEV

Formula C53H86N10O15

Absent Amino Acids ARNDCQHKMPSTWY

Common Amino Acids V

Mass 1103.32

PI 3.13

Basic Residues 0

Acidic Residues 2

Hydrophobic Residues 7

Net Charge -2

Boman Index 2.33

Hydrophobicity 2.050

Aliphatic Index 194.00

Half Life

Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 0

number

0

A

0

R

0

N

0

D

0

C

2

E

0

Q

1

G

0

H

1

I

1

L

0

K

0

M

1

F

0

P

0

S

0

T

0

W

0

Y

4

V

Amino Acid Distribution

A: 0 R: 0 N: 0 D: 0 C: 0 E: 2 Q: 0 G: 1 H: 0 I: 1 L: 1 K: 0 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 4

Length

10

Formula

C53H86N10O15

Mass

1103.32

PI

3.13

Net Charge

-2

Boman Index

2.33

Hydrophobicity

2.050

Evidence 1 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0201

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 2 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0202

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 3 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0203

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 4 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*0206

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Evidence 5 Activity

Activity

Detail Source Activity Tumor T cell antigens

Assay & Model

Experimental Method in vitro

Source & Reference

Database Source NA

Source TANTIGEN/TADB

Other

Record Type T-cell epitope

HLA Allele A*6802

Epitope Type Shared tumor specific antigen

Genomic Origin Shared tumor specific antigen

Epitope_Type

Shared tumor specific antigen

Genomic_Origin

Shared tumor specific antigen

HLA_Allele

A*0201 A*0202 A*0203 A*0206 A*6802