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Peptide record

TPDB63763

Pen-NBD Cell-penetrating Peptides standard
27 amino acids
Basic Information
3D PDB MODEL
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TPDB63763
Pen-NBD
Cell-penetrating Peptides
Delivery and barrier-penetrating peptides
CPPsite3.0
standard
No
A 27-aa standard natural cell-penetrating peptides peptide sequence curated from CPPsite3.0, with an available 3D structural model.
N-terminal: Conjugated with Rhodamine B
Sequence
RQIKIWFQNRRMKWKKTALDWSWLQTE
Physicochemical Analysis
C166H254N48O39S1
CGHPYV
KW
3578.20
11.53
7
2
11
+5
1.54
-1.215
61.48
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
22000
614.83
7
Residue Composition
number
1
A
3
R
1
N
1
D
0
C
1
E
3
Q
0
G
0
H
2
I
2
L
4
K
1
M
1
F
0
P
1
S
2
T
4
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 3 N: 1 D: 1 C: 0 E: 1 Q: 3 G: 0 H: 0 I: 2 L: 2 K: 4 M: 1 F: 1 P: 0 S: 1 T: 2 W: 4 Y: 0 V: 0
Chemical Descriptors
27
C166H254N48O39S1
3578.20
11.53
+5
1.54
-1.215
Free
L
Linear
Conjugated with Rhodamine B
N[C@@H](CCCN=C)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CC1=CN=C(C)/C/1=C\C)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](CC(=O)N)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCSC)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC1=C(C(=NC1)C)CC)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](CC1=CN=C(C)/C/1=C\C)C(=O)N[C@@H](CO)C(=O)N[C@@H](CC1=CN=C(C)/C/1=C\C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](CCC(=O)O)C(=O)O
Evidence Records 1 records
Evidence 1 Activity

Activity

Cell-penetrating Peptides

Target

Human Myometrial Cells

Source & Reference

CPPsite3.0
CPPsite3

Other

Source Activity Label Source Definition
Cell-penetrating Peptides
CPPsite3.0 experimentally validated cell-penetrating peptide annotation.
Natural residues Linear L
Protein derived
NBD peptide
Larger fluorescence than Pen-NBD
In vitro
CCCCCCSSSCCCCCCCSSSSCCCCCCC
Additional Detail Fields 1 fields
CCCCCCSSSCCCCCCCSSSSCCCCCCC