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Peptide record

TPDB61590

PDM/16 (bPDM/16 ) Cell-penetrating Peptides standard
29 amino acids
Basic Information
3D PDB MODEL
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TPDB61590
PDM/16 (bPDM/16 )
Cell-penetrating Peptides
Delivery and barrier-penetrating peptides
CPPsite3.0
standard
No
A 29-aa standard natural cell-penetrating peptides peptide sequence curated from CPPsite3.0, with an available 3D structural model.
N-terminal: Biotinylation
Sequence
CSPQYTIIADAGDAAAHPSAAAARKRRKR
Physicochemical Analysis
C128H214N46O39S1
NELMFWV
A
3053.45
10.69
7
2
12
+4
7.20
-0.655
57.93
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
1490
48.80
6
Residue Composition
number
9
A
4
R
0
N
2
D
1
C
0
E
1
Q
1
G
1
H
2
I
0
L
2
K
0
M
0
F
2
P
2
S
1
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 9 R: 4 N: 0 D: 2 C: 1 E: 0 Q: 1 G: 1 H: 1 I: 2 L: 0 K: 2 M: 0 F: 0 P: 2 S: 2 T: 1 W: 0 Y: 1 V: 0
Chemical Descriptors
29
C128H214N46O39S1
3053.45
10.69
+4
7.20
-0.655
Free
L
Linear
Biotinylation
N[C@@H](CS)C(=O)N[C@@H](CO)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](C)C(=O)NCC(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](Cc1[nH]cnc1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CO)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CCSC)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCN=C)C(=O)O
Evidence Records 1 records
Evidence 1 Activity

Activity

Cell-penetrating Peptides

Target

HeLa-S3 Cells And Hacat Cells

Assay & Model

HPV16:pClucF PsV infected mice
HPV16:pClucF PsV infected mice

Source & Reference

CPPsite3.0
CPPsite3

Other

Source Activity Label Source Definition
Cell-penetrating Peptides
CPPsite3.0 experimentally validated cell-penetrating peptide annotation.
Natural residues Linear L
Chimeric
Cytoplasm
Mutant bPDM/16 showed only the diffuse distribution
In vitro and in vivo
CCCSSTTSSCTTCSSSCCCTTTTCCCCC
Additional Detail Fields 1 fields
CCCSSTTSSCTTCSSSCCCTTTTCCCCC