Back to search

Peptide record

TPDB61063

PN27 (SEQ ID NO: 38) Cell-penetrating Peptides standard
29 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB61063
PN27 (SEQ ID NO: 38)
Cell-penetrating Peptides
Delivery and barrier-penetrating peptides
CellPPD CellPPD-MOD CPPsite3.0 MLCPP 2.0 Peptipedia PerseuCPP
standard
No
A 29-aa standard natural cell-penetrating peptides peptide sequence curated from CellPPD, CellPPD-MOD, CPPsite3.0, and other sources, with an available 3D structural model.
C-terminal: Amidation
Sequence
AAVALLPAVLLALLAPRKKRRQRRRPPQC-NH2
Physicochemical Analysis
C145H261N51O32S1
NDEGHIMFSTWY
ARL
3263.05
12.71
8
0
14
+8
5.32
-0.128
121.38
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
6
A
6
R
0
N
0
D
1
C
0
E
2
Q
0
G
0
H
0
I
6
L
2
K
0
M
0
F
4
P
0
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 6 R: 6 N: 0 D: 0 C: 1 E: 0 Q: 2 G: 0 H: 0 I: 0 L: 6 K: 2 M: 0 F: 0 P: 4 S: 0 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
29
C145H261N51O32S1
3263.05
12.71
+8
5.32
-0.128
Amidation
L
Linear
Free
N[C@@H](C)C(=O)N[C@@H](C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N1CCC[C@H]1C(=O)N[C@@H](C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCN=C)C(=O)N[C@@H](CCCN=C)C(=O)N1CCC[C@H]1C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](CS)C(=O)O
Evidence Records 1 records
Evidence 1 Activity

Activity

Cell-penetrating Peptides

Target

9 L/LacZ cells

Source & Reference

CPPsite3.0
CPPsite3
US 20060035815

Other

Source Activity Label Source Definition
Cell-penetrating Peptides
CPPsite3.0 experimentally validated cell-penetrating peptide annotation.
Natural residues Linear L
Synthetic
Nucleic acid (siRNA)
In vitro
CCSSSHHIIIIISSCCTTCSSCCCCCSCC
Additional Detail Fields 1 fields
CCSSSHHIIIIISSCCTTCSSCCCCCSCC