TPDB

3D PDB MODEL

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TPDB ID TPDB60933

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 32-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

YGGFMKVMQEIDHWPLVPVIRKVMHKESTKSL

FASTA

>TPDB60933|Neuropeptide|length=32
YGGFMKVMQEIDHWPLVPVIRKVMHKESTKSL

Formula C173H275N45O44S3

Absent Amino Acids ANC

Common Amino Acids KV

Mass 3785.54

PI 9.97

Basic Residues 7

Acidic Residues 3

Hydrophobic Residues 14

Net Charge +2

Boman Index 7.79

Hydrophobicity -0.222

Aliphatic Index 85.00

Half Life

Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min

Extinction Coefficient Cystines 6990

Absorbance 280nm 184.65

Polar Residues 5

number

0

A

1

R

0

N

1

D

0

C

2

E

1

Q

2

G

2

H

2

I

2

L

4

K

3

M

1

F

2

P

2

S

1

T

1

W

1

Y

4

V

Amino Acid Distribution

A: 0 R: 1 N: 0 D: 1 C: 0 E: 2 Q: 1 G: 2 H: 2 I: 2 L: 2 K: 4 M: 3 F: 1 P: 2 S: 2 T: 1 W: 1 Y: 1 V: 4

Length

32

Formula

C173H275N45O44S3

Mass

3785.54

PI

9.97

Net Charge

+2

Boman Index

7.79

Hydrophobicity

-0.222

Evidence 1 Activity

Source & Reference

Database Source NA