TPDB

3D PDB MODEL

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TPDB ID TPDB60631

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 25-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

VRDYPQLLDSGMKRQDVVHSFLRFZ

FASTA

>TPDB60631|Neuropeptide|length=25
VRDYPQLLDSGMKRQDVVHSFLRFZ

Formula C130H204N38O36S1

Absent Amino Acids ANCEITW

Common Amino Acids RDLV

Mass 2907.34

PI 9.74

Basic Residues 5

Acidic Residues 3

Hydrophobic Residues 10

Net Charge +1

Boman Index 5.05

Hydrophobicity -0.460

Aliphatic Index 81.60

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 51.25

Polar Residues 5

number

0

A

3

R

0

N

3

D

0

C

0

E

2

Q

1

G

1

H

0

I

3

L

1

K

1

M

2

F

1

P

2

S

0

T

0

W

1

Y

3

V

Amino Acid Distribution

A: 0 R: 3 N: 0 D: 3 C: 0 E: 0 Q: 2 G: 1 H: 1 I: 0 L: 3 K: 1 M: 1 F: 2 P: 1 S: 2 T: 0 W: 0 Y: 1 V: 3

Length

25

Formula

C130H204N38O36S1

Mass

2907.34

PI

9.74

Net Charge

+1

Boman Index

5.05

Hydrophobicity

-0.460

Evidence 1 Activity

Source & Reference

Database Source NA