TPDB

3D PDB MODEL

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TPDB ID TPDB60557

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 37-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

YPPQPENPGSHASPEDWAKYHAAVRHYVNLITRQRYZ

FASTA

>TPDB60557|Neuropeptide|length=37
YPPQPENPGSHASPEDWAKYHAAVRHYVNLITRQRYZ

Formula C192H279N57O54

Absent Amino Acids CMF

Common Amino Acids P

Mass 4249.68

PI 9.34

Basic Residues 7

Acidic Residues 3

Hydrophobic Residues 13

Net Charge +1

Boman Index 9.21

Hydrophobicity -1.200

Aliphatic Index 47.57

Half Life

Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min

Extinction Coefficient Cystines 11460

Absorbance 280nm 269.67

Polar Residues 11

number

4

A

3

R

2

N

1

D

0

C

2

E

2

Q

1

G

3

H

1

I

1

L

1

K

0

M

0

F

5

P

2

S

1

T

1

W

4

Y

2

V

Amino Acid Distribution

A: 4 R: 3 N: 2 D: 1 C: 0 E: 2 Q: 2 G: 1 H: 3 I: 1 L: 1 K: 1 M: 0 F: 0 P: 5 S: 2 T: 1 W: 1 Y: 4 V: 2

Length

37

Formula

C192H279N57O54

Mass

4249.68

PI

9.34

Net Charge

+1

Boman Index

9.21

Hydrophobicity

-1.200

Evidence 1 Activity

Source & Reference

Database Source NA