TPDB

3D PDB MODEL

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TPDB ID TPDB60456

Peptide_Name

Dermorphin

Activity

Blood-Brain Barrier Cell-penetrating Peptides Neuropeptide

Activity_category_statistics

Delivery and barrier-penetrating peptides Neuroactive peptides

Database_Source

B3Pred BBPpredict Peptipedia CPPsite3.0

Sequence_Type

standard

Has_Modification No

Description A 7-aa standard natural multi-activity (Blood-Brain Barrier, Cell-penetrating Peptides, and Neuropeptide) peptide sequence curated from B3Pred, BBPpredict, Peptipedia, and other sources, with an available 3D structural model.

Sequence

YAFGYPS

FASTA

>TPDB60456|Blood-Brain Barrier;Cell-penetrating Peptides;Neuropeptide|length=7
YAFGYPS

Formula C40H49N7O11

Absent Amino Acids RNDCEQHILKMTWV

Common Amino Acids Y

Mass 803.87

PI 5.88

Basic Residues 0

Acidic Residues 0

Hydrophobic Residues 4

Net Charge -0

Boman Index -2.59

Hydrophobicity -0.114

Aliphatic Index 14.29

Half Life

Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min

Extinction Coefficient Cystines 2980

Absorbance 280nm 370.71

Polar Residues 3

number

1

A

0

R

0

N

0

D

0

C

0

E

0

Q

1

G

0

H

0

I

0

L

0

K

0

M

1

F

1

P

1

S

0

T

0

W

2

Y

0

V

Amino Acid Distribution

A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 0 L: 0 K: 0 M: 0 F: 1 P: 1 S: 1 T: 0 W: 0 Y: 2 V: 0

Length

7

Formula

C40H49N7O11

Mass

803.87

PI

5.88

Net Charge

Database Source NA

Source NeuroPepV2

Other

Organism Source Phyllomedusa

Family Opioid

Family

Dermorphin Opioid