TPDB

3D PDB MODEL

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TPDB ID TPDB60186

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 44-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

STKPSGCALITCLYHDLVHLLHETNNKQREPCAPLKKMGINGYZ

FASTA

>TPDB60186|Neuropeptide|length=44
STKPSGCALITCLYHDLVHLLHETNNKQREPCAPLKKMGINGYZ

Formula C209H338N60O61S4

Absent Amino Acids FW

Common Amino Acids L

Mass 4795.59

PI 8.53

Basic Residues 8

Acidic Residues 3

Hydrophobic Residues 14

Net Charge +2

Boman Index 9.74

Hydrophobicity -0.398

Aliphatic Index 82.05

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 3105

Absorbance 280nm 64.75

Polar Residues 14

number

2

A

1

R

3

N

1

D

3

C

2

E

1

Q

3

G

3

H

2

I

6

L

4

K

1

M

0

F

3

P

2

S

3

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 2 R: 1 N: 3 D: 1 C: 3 E: 2 Q: 1 G: 3 H: 3 I: 2 L: 6 K: 4 M: 1 F: 0 P: 3 S: 2 T: 3 W: 0 Y: 2 V: 1

Length

44

Formula

C209H338N60O61S4

Mass

4795.59

PI

8.53

Net Charge

+2

Boman Index

9.74

Hydrophobicity

-0.398

Evidence 1 Activity

Source & Reference

Database Source NA