TPDB

3D PDB MODEL

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TPDB ID TPDB60130

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 31-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

SSDASESHELEPGSYARLDRGGKAGNFVRLZ

FASTA

>TPDB60130|Neuropeptide|length=31
SSDASESHELEPGSYARLDRGGKAGNFVRLZ

Formula C135H213N43O48

Absent Amino Acids CQIMTW

Common Amino Acids S

Mass 3206.44

PI 5.46

Basic Residues 5

Acidic Residues 5

Hydrophobic Residues 9

Net Charge -1

Boman Index 10.27

Hydrophobicity -0.848

Aliphatic Index 56.77

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 46.47

Polar Residues 7

number

3

A

3

R

1

N

2

D

0

C

3

E

0

Q

4

G

1

H

0

I

3

L

1

K

0

M

1

F

1

P

5

S

0

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 3 R: 3 N: 1 D: 2 C: 0 E: 3 Q: 0 G: 4 H: 1 I: 0 L: 3 K: 1 M: 0 F: 1 P: 1 S: 5 T: 0 W: 0 Y: 1 V: 1

Length

31

Formula

C135H213N43O48

Mass

3206.44

PI

5.46

Net Charge

-1

Boman Index

10.27

Hydrophobicity

-0.848

Evidence 1 Activity

Source & Reference

Database Source NA