TPDB

3D PDB MODEL

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TPDB ID TPDB59829

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 10-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

VPGSYAFGLZ

FASTA

>TPDB59829|Neuropeptide|length=10
VPGSYAFGLZ

Formula C44H63N9O12

Absent Amino Acids RNDCEQHIKMTW

Common Amino Acids G

Mass 910.04

PI 5.94

Basic Residues 0

Acidic Residues 0

Hydrophobic Residues 5

Net Charge -0

Boman Index -2.13

Hydrophobicity 0.810

Aliphatic Index 78.00

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 163.73

Polar Residues 2

number

1

A

0

R

0

N

0

D

0

C

0

E

0

Q

2

G

0

H

0

I

1

L

0

K

0

M

1

F

1

P

1

S

0

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 0 L: 1 K: 0 M: 0 F: 1 P: 1 S: 1 T: 0 W: 0 Y: 1 V: 1

Length

10

Formula

C44H63N9O12

Mass

910.04

PI

5.94

Net Charge

-0

Boman Index

-2.13

Hydrophobicity

0.810

Evidence 1 Activity

Source & Reference

Database Source NA