TPDB

3D PDB MODEL

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TPDB ID TPDB59806

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 28-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

VLGRSANSQGHSNQGDKGEYILPLPRLZ

FASTA

>TPDB59806|Neuropeptide|length=28
VLGRSANSQGHSNQGDKGEYILPLPRLZ

Formula C125H204N40O40

Absent Amino Acids CMFTW

Common Amino Acids GL

Mass 2907.24

PI 9.74

Basic Residues 4

Acidic Residues 2

Hydrophobic Residues 8

Net Charge +1

Boman Index 6.56

Hydrophobicity -0.711

Aliphatic Index 83.57

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 51.25

Polar Residues 8

number

1

A

2

R

2

N

1

D

0

C

1

E

2

Q

4

G

1

H

1

I

4

L

1

K

0

M

0

F

2

P

3

S

0

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 1 R: 2 N: 2 D: 1 C: 0 E: 1 Q: 2 G: 4 H: 1 I: 1 L: 4 K: 1 M: 0 F: 0 P: 2 S: 3 T: 0 W: 0 Y: 1 V: 1

Length

28

Formula

C125H204N40O40

Mass

2907.24

PI

9.74

Net Charge

+1

Boman Index

6.56

Hydrophobicity

-0.711

Evidence 1 Activity

Source & Reference

Database Source NA