TPDB

3D PDB MODEL

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TPDB ID TPDB59769

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 48-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

VCVTTTKADGGDVMSGGEGGEMTAMADAIKYLQGLDKVYGQAARPRFZ

FASTA

>TPDB59769|Neuropeptide|length=48
VCVTTTKADGGDVMSGGEGGEMTAMADAIKYLQGLDKVYGQAARPRFZ

Formula C207H334N58O69S4

Absent Amino Acids NHW

Common Amino Acids G

Mass 4867.52

PI 4.72

Basic Residues 5

Acidic Residues 6

Hydrophobic Residues 19

Net Charge -1

Boman Index 9.82

Hydrophobicity -0.188

Aliphatic Index 61.04

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 61.22

Polar Residues 10

number

6

A

2

R

0

N

4

D

1

C

2

E

2

Q

8

G

0

H

1

I

2

L

3

K

3

M

1

F

1

P

1

S

4

T

0

W

2

Y

4

V

Amino Acid Distribution

A: 6 R: 2 N: 0 D: 4 C: 1 E: 2 Q: 2 G: 8 H: 0 I: 1 L: 2 K: 3 M: 3 F: 1 P: 1 S: 1 T: 4 W: 0 Y: 2 V: 4

Length

48

Formula

C207H334N58O69S4

Mass

4867.52

PI

4.72

Net Charge

-1

Boman Index

9.82

Hydrophobicity

-0.188

Evidence 1 Activity

Source & Reference

Database Source NA