TPDB

3D PDB MODEL

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TPDB ID TPDB59620

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 71-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

SWKPRSQLQDASSGPGTNEDLEQRQFNKLGSASHHRRQLGLQGPQHFIADLSKKERPRMEEEEEAYGWMDF

FASTA

>TPDB59620|Neuropeptide|length=71
SWKPRSQLQDASSGPGTNEDLEQRQFNKLGSASHHRRQLGLQGPQHFIADLSKKERPRMEEEEEAYGWMDF

Formula C356H546N110O114S2

Absent Amino Acids CV

Common Amino Acids E

Mass 8255.04

PI 5.85

Basic Residues 13

Acidic Residues 12

Hydrophobic Residues 19

Net Charge -2

Boman Index 27.75

Hydrophobicity -1.369

Aliphatic Index 44.08

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12490

Absorbance 280nm 151.30

Polar Residues 18

number

4

A

6

R

2

N

4

D

0

C

8

E

7

Q

6

G

3

H

1

I

6

L

4

K

2

M

3

F

4

P

7

S

1

T

2

W

1

Y

0

V

Amino Acid Distribution

A: 4 R: 6 N: 2 D: 4 C: 0 E: 8 Q: 7 G: 6 H: 3 I: 1 L: 6 K: 4 M: 2 F: 3 P: 4 S: 7 T: 1 W: 2 Y: 1 V: 0

Length

71

Formula

C356H546N110O114S2

Mass

8255.04

PI

5.85

Net Charge

-2

Boman Index

27.75

Hydrophobicity

-1.369

Evidence 1 Activity

Source & Reference

Database Source NA