TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB59461

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 99-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

SQEEPALLARQATEVVPSFINKDAEPFDTTLKCLPNLSEELKAVLSEAQASLPELQHAPVLSDSVVSLEGFKKTLHDRLGEAEDGSPPGLKYLQSDTHS

FASTA

>TPDB59461|Neuropeptide|length=99
SQEEPALLARQATEVVPSFINKDAEPFDTTLKCLPNLSEELKAVLSEAQASLPELQHAPVLSDSVVSLEGFKKTLHDRLGEAEDGSPPGLKYLQSDTHS

Formula C471H752N124O158S1

Absent Amino Acids MW

Common Amino Acids L

Mass 10711.95

PI 4.38

Basic Residues 11

Acidic Residues 17

Hydrophobic Residues 35

Net Charge -9

Boman Index 35.16

Hydrophobicity -0.406

Aliphatic Index 89.70

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 13.91

Polar Residues 25

number

9

A

2

R

2

N

6

D

1

C

11

E

5

Q

4

G

3

H

1

I

15

L

6

K

0

M

3

F

8

P

11

S

5

T

0

W

1

Y

6

V

Amino Acid Distribution

A: 9 R: 2 N: 2 D: 6 C: 1 E: 11 Q: 5 G: 4 H: 3 I: 1 L: 15 K: 6 M: 0 F: 3 P: 8 S: 11 T: 5 W: 0 Y: 1 V: 6

Length

99

Formula

C471H752N124O158S1

Mass

10711.95

PI

4.38

Net Charge

-9

Boman Index

35.16

Hydrophobicity

-0.406

Evidence 1 Activity

Source & Reference

Database Source NA